SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
D3Z0V7	Tsc22d1	NSQLEQENNLLK	BrainStem	—	100.0	None	—
D3Z0V7	Tsc22d1	NSQLEQENNLLK	Cerebellum	—	100.0	None	—
D3Z0V7	Tsc22d1	NSQLEQENNLLK	Cerebrum	—	100.0	None	—
D3Z0V7	Tsc22d1	VLPLTTPLVDGEDESSGASVVAIDNK	BrainStem	—	100.0	None	—
D3Z0V7	Tsc22d1	VLPLTTPLVDGEDESSGASVVAIDNK	Cerebellum	—	100.0	None	—
D3Z0V7	Tsc22d1	VLPLTTPLVDGEDESSGASVVAIDNK	Cerebrum	—	100.0	None	—
D3Z0V7	Tsc22d1	VLPLTTPLVDGEDESSGASVVAIDNK	MockWholeBrain	—	100.0	None	—
D3Z0X5	Phldb1	VQTDKPHLVSLGSGR	BrainStem	—	100.0	None	—
D3Z0X5	Phldb1	YHSLTGGRPFPK	BrainStem	—	100.0	None	—
D3Z0Y4	Ablim2	TTWLLLK	Cerebellum	—	100.0	None	—
D3Z0Y4	Ablim2	TTWLLLK	MockWholeBrain	—	100.0	None	—
D3Z183	Mfsd6	EPEPPSNETPSSTETSAIPEEEIDWIEK	BrainStem	—	100.0	None	—
D3Z183	Mfsd6	VAILTDDEEEQK	BrainStem	—	100.0	None	—
D3Z183	Mfsd6	VAILTDDEEEQK	Cerebellum	—	100.0	None	—
D3Z183	Mfsd6	VAILTDDEEEQK	Cerebrum	—	100.0	None	—
D3Z1I2	Git2	AGQILQAELLAVYGADPGTQDSSGK	Cerebellum	—	100.0	None	—
D3Z1I2	Git2	GSTPLHVASK	Cerebellum	—	100.0	None	—
D3Z1I2	Git2	LSLDLSELAK	BrainStem	—	100.0	None	—
D3Z1I2	Git2	LSLDLSELAK	Cerebellum	—	100.0	None	—
D3Z1I2	Git2	LSLDLSELAK	Cerebrum	—	100.0	None	—
D3Z1I2	Git2	LSLDLSELAK	MockWholeBrain	—	100.0	None	—
D3Z1I2	Git2	QLVTITTK	Cerebellum	—	100.0	None	—
D3Z1N4	Pbrm1	DIDLLAK	Cerebellum	—	100.0	None	—
D3Z1N4	Pbrm1	HYNEEGSQVYNDAHILEK	Cerebellum	—	100.0	None	—
D3Z1N4	Pbrm1	LISELFQK	Cerebellum	—	100.0	None	—
D3Z1N4	Pbrm1	LLHSEAYLK	Cerebellum	—	100.0	None	—
D3Z1N4	Pbrm1	LNEVYEAVK	Cerebellum	—	100.0	None	—
D3Z1N4	Pbrm1	LPSHWLK	Cerebellum	—	100.0	None	—
D3Z1R2	Mthfsd	VDPDKPLEGVR	Cerebrum	—	100.0	None	—
D3Z1Y5	Arhgap22	FLDEVQAHSDVNK	BrainStem	—	100.0	None	—
D3Z2H2	Ctnnd1	AAALVLQTIWGYK	Cerebellum	—	100.0	None	—
D3Z2H2	Ctnnd1	GIPILVGLLDHPK	Cerebellum	—	100.0	None	—
D3Z2H2	Ctnnd1	IYISLLK	Cerebellum	—	100.0	None	—
D3Z2H2	Ctnnd1	KPTEDPANDTVDFPK	Cerebellum	—	100.0	None	—
D3Z2H9	Tpm3-rs7	LATALQK	Cerebellum	—	100.0	None	—
D3Z2H9	Tpm3-rs7	LATALQK	Cerebrum	—	100.0	None	—
D3Z2R5	Selenon	LPSGEPLQFVFEEIK	BrainStem	—	100.0	None	—
D3Z2W0	Tnip1	LQAQVTLTNAQLK	BrainStem	—	100.0	None	—
D3Z2W0	Tnip1	LQAQVTLTNAQLK	Cerebellum	—	100.0	None	—
D3Z2W0	Tnip1	LQAQVTLTNAQLK	Cerebrum	—	100.0	None	—
D3Z2W0	Tnip1	VPEAGAFGAAEK	Cerebrum	—	100.0	None	—
D3Z2Z1	Clip1	ANENASFLQK	BrainStem	—	100.0	None	—
D3Z2Z1	Clip1	EEQFNVLSSELEK	BrainStem	—	100.0	None	—
D3Z2Z1	Clip1	EEQFNVLSSELEK	Cerebellum	—	100.0	None	—
D3Z2Z1	Clip1	ELEQSLLFEK	Cerebellum	—	100.0	None	—
D3Z2Z1	Clip1	ELEVLQAK	Cerebrum	—	100.0	None	—
D3Z2Z1	Clip1	ELLSVENQK	Cerebellum	—	100.0	None	—
D3Z2Z1	Clip1	ELVLTGLQDSLNQVNQVK	BrainStem	—	100.0	None	—
D3Z2Z1	Clip1	ELVLTGLQDSLNQVNQVK	Cerebellum	—	100.0	None	—
D3Z2Z1	Clip1	ELVLTGLQDSLNQVNQVK	Cerebrum	—	100.0	None	—

SysQuan Mouse Database

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