SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
D3YZP9	Ccdc6	AELEQHLEQEQEFQVNK	Cerebrum	—	100.0	None	—
D3YZP9	Ccdc6	AEQEEEFISNTLFK	Cerebellum	—	100.0	None	—
D3YZP9	Ccdc6	AEQEEEFISNTLFK	Cerebrum	—	100.0	None	—
D3YZP9	Ccdc6	IELETYK	BrainStem	—	100.0	None	—
D3YZP9	Ccdc6	IELETYK	Cerebellum	—	100.0	None	—
D3YZP9	Ccdc6	LASLQQENK	BrainStem	—	100.0	None	—
D3YZP9	Ccdc6	LASLQQENK	Cerebellum	—	100.0	None	—
D3YZP9	Ccdc6	LASLQQENK	Cerebrum	—	100.0	None	—
D3YZP9	Ccdc6	LASLQQENK	MockWholeBrain	—	100.0	None	—
D3YZU1	Shank1	AQFLDHEIDGSHLPALTK	BrainStem	—	100.0	None	—
D3YZU1	Shank1	LPPTAPGVGPLLLQLGPEPPTPHPGVSK	BrainStem	—	100.0	None	—
D3YZU4	Shank1	AQFLDHEIDGSHLPALTK	Cerebrum	—	100.0	None	—
D3YZU4	Shank1	AYGGSGSSSAFTSFLPPRPLVHPLTGK	Cerebrum	—	100.0	None	—
D3YZU4	Shank1	EQDVVPFQESPK	BrainStem	—	100.0	None	—
D3YZU4	Shank1	IGIPDLHQTK	BrainStem	—	100.0	None	—
D3YZU4	Shank1	IGIPDLHQTK	Cerebrum	—	100.0	None	—
D3YZU4	Shank1	LDEILAAAQQTISASESPGPGGLASLGK	Cerebrum	—	100.0	None	—
D3YZU4	Shank1	LPPTAPGVGPLLLQLGPEPPTPHPGVSK	BrainStem	—	100.0	None	—
D3YZU4	Shank1	LPPTAPGVGPLLLQLGPEPPTPHPGVSK	Cerebrum	—	100.0	None	—
D3YZU4	Shank1	LSEDSQTSLLSK	BrainStem	—	100.0	None	—
D3YZU4	Shank1	NSIPIPTIIIK	BrainStem	—	100.0	None	—
D3YZU4	Shank1	SEPPPAGPSEK	Cerebrum	—	100.0	None	—
D3YZU4	Shank1	SYQAQGEGEISLSK	BrainStem	—	100.0	None	—
D3YZU4	Shank1	VLSIGEGGFWEGQVK	BrainStem	—	100.0	None	—
D3YZU5	Shank1	APSPSLLPASDHK	Cerebellum	—	100.0	None	—
D3YZU5	Shank1	APSPSLLPASDHK	Cerebrum	—	100.0	None	—
D3YZU5	Shank1	APSPSLLPASDHK	MockWholeBrain	—	100.0	None	—
D3YZU5	Shank1	AQFLDHEIDGSHLPALTK	Cerebrum	—	100.0	None	—
D3YZU5	Shank1	ASIISELSSK	Cerebellum	—	100.0	None	—
D3YZU5	Shank1	ASIISELSSK	Cerebrum	—	100.0	None	—
D3YZU5	Shank1	EQDVVPFQESPK	Cerebellum	—	100.0	None	—
D3YZU5	Shank1	EQDVVPFQESPK	Cerebrum	—	100.0	None	—
D3YZU5	Shank1	EYPQSFEK	Cerebellum	—	100.0	None	—
D3YZU5	Shank1	FLEYVQLGTSDK	Cerebellum	—	100.0	None	—
D3YZU5	Shank1	HYTVGSYDSFDAPSDYIIK	Cerebellum	—	100.0	None	—
D3YZU5	Shank1	IGIPDLHQTK	Cerebellum	—	100.0	None	—
D3YZU5	Shank1	LDEILAAAQQTISASESPGPGGLASLGK	Cerebrum	—	100.0	None	—
D3YZU5	Shank1	LDEILAAAQQTISASESPGPGGLASLGK	MockWholeBrain	—	100.0	None	—
D3YZU5	Shank1	LPPTAPGVGPLLLQLGPEPPTPHPGVSK	Cerebellum	—	100.0	None	—
D3YZU5	Shank1	LPPTAPGVGPLLLQLGPEPPTPHPGVSK	Cerebrum	—	100.0	None	—
D3YZU5	Shank1	LPPTAPGVGPLLLQLGPEPPTPHPGVSK	MockWholeBrain	—	100.0	None	—
D3YZU5	Shank1	LSEDSQTSLLSK	Cerebrum	—	100.0	None	—
D3YZU5	Shank1	NSIPIPTIIIK	Cerebrum	—	100.0	None	—
D3YZU5	Shank1	NSIPIPTIIIK	MockWholeBrain	—	100.0	None	—
D3YZU5	Shank1	PLGFWTK	Cerebellum	—	100.0	None	—
D3YZU5	Shank1	PLGFWTK	Cerebrum	—	100.0	None	—
D3YZU5	Shank1	SEPPPAGPSEK	Cerebellum	—	100.0	None	—
D3YZU5	Shank1	SEPPPAGPSEK	Cerebrum	—	100.0	None	—
D3YZU5	Shank1	SEPPPAGPSEK	MockWholeBrain	—	100.0	None	—
D3YZU5	Shank1	SYQAQGEGEISLSK	Cerebrum	—	100.0	None	—

SysQuan Mouse Database

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