SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
A0A087WSN6	Fn1	SYTITGLQPGTDYK	Muscle	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	VGDTYERPK	AdrenalGland	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	VGDTYERPK	kidney	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	YEKPGSPPR	kidney	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	YEKPGSPPR	Trachea	—	100.0	MRM+PRM	—
A0A0A0MQA6	Macf1	ELEEAVTSALQQETEK	SalivaryGland	—	100.0	MRM+PRM	—
A0A0A0MQF6	Gapdh	VIPELNGK	Muscle	—	100.0	MRM+PRM	—
A0A0A6YWG7	Rapgef2	DLTFLHEGNDSK	BrainStem	—	100.0	MRM+PRM	—
A0A0A6YWG7	Rapgef2	DLTFLHEGNDSK	Cerebellum	—	100.0	MRM+PRM	—
A0A0A6YWG7	Rapgef2	DLTFLHEGNDSK	Cerebrum	—	100.0	MRM+PRM	—
A0A0A6YWG7	Rapgef2	DLTFLHEGNDSK	lung	—	100.0	MRM+PRM	—
A0A0A6YX18	Atp6v1h	GAVDAAVPTNIIAAK	Cerebellum	—	100.0	MRM+PRM	—
A0A0A6YX18	Atp6v1h	LGESVQDLSSFDEYSSELK	BrainStem	—	100.0	MRM+PRM	—
A0A0G2JEU1	Aldh2	TEQGPQVDETQFK	Cerebellum	—	100.0	MRM+PRM	—
A0A0G2JEU1	Aldh2	TEQGPQVDETQFK	TailSkin	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	BoneMarrow	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	BrainStem	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	Gallbladder	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	kidney	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	lung	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	Muscle	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	SalivaryGland	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	SciaticNerve	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	Spleen	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	TailSkin	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	Thymus	—	100.0	MRM+PRM	—
A0A0G2JGD2	S100a4	ELPSFLGK	Thyroid	—	100.0	MRM+PRM	—
A0A0J9YUQ8	Gsn	QTQVSVLPEGGETPLFK	BrainStem	—	100.0	MRM+PRM	—
A0A0J9YUQ8	Gsn	QTQVSVLPEGGETPLFK	Cerebellum	—	100.0	MRM+PRM	—
A0A0N4SVB8	Arl8b	DLPNALDEK	kidney	—	100.0	MRM+PRM	—
A0A0R4J005	Lims1	VIEGDVVSALNK	Spleen	—	100.0	MRM+PRM	—
A0A0R4J036	Nefm	EYQDLLNVK	Cerebellum	—	100.0	MRM+PRM	—
A0A0R4J036	Nefm	EYQDLLNVK	SciaticNerve	—	100.0	MRM+PRM	—
A0A0R4J049	Prmt5	YSQYQQAIYK	BrainStem	—	100.0	MRM+PRM	—
A0A0R4J049	Prmt5	YSQYQQAIYK	Cerebrum	—	100.0	MRM+PRM	—
A0A0R4J049	Prmt5	YSQYQQAIYK	Heart	—	100.0	MRM+PRM	—
A0A0R4J049	Prmt5	YSQYQQAIYK	lung	—	100.0	MRM+PRM	—
A0A0R4J049	Prmt5	YSQYQQAIYK	Spermatozoa	—	100.0	MRM+PRM	—
A0A0R4J1E2	Eef1d	VGTDLLEEEITK	BrainStem	—	100.0	MRM+PRM	—
A0A0R4J1E2	Eef1d	VGTDLLEEEITK	Cerebellum	—	100.0	MRM+PRM	—
A0A0R4J259	Syncrip	DLFEDELVPLFEK	BrainStem	—	100.0	MRM+PRM	—
A0A0R4J259	Syncrip	DLFEDELVPLFEK	Cerebellum	—	100.0	MRM+PRM	—
A0A0R4J259	Syncrip	DLFEDELVPLFEK	lung	—	100.0	MRM+PRM	—
A0A0R4J259	Syncrip	DLFEDELVPLFEK	Muscle	—	100.0	MRM+PRM	—
A0A0R4J259	Syncrip	VTEGLTDVILYHQPDDK	BrainStem	—	100.0	MRM+PRM	—
A0A0R4J259	Syncrip	VTEGLTDVILYHQPDDK	Cerebellum	—	100.0	MRM+PRM	—
A0A0R4J259	Syncrip	VTEGLTDVILYHQPDDK	Muscle	—	100.0	MRM+PRM	—
A0A0R4J2B2	Kctd12	FNFLEQAFDK	BrainStem	—	100.0	MRM+PRM	—
A0A0R4J2B2	Kctd12	FNFLEQAFDK	Cerebellum	—	100.0	MRM+PRM	—
A0A0R4J2B2	Kctd12	FNFLEQAFDK	liver	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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