SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q99LX0	Park7	VTVAGLAGK	BrainStem	—	100.0	MRM	—
Q99LX0	Park7	VTVAGLAGK	Cerebrum	—	100.0	MRM	—
Q99MN9	Pccb	LLYAFAEATVPK	MockWholeBrain	—	100.0	MRM	—
Q99N15	Hsd17b10	GVIINTASVAAFEGQVGQAAYSASK	BrainStem	—	100.0	MRM	—
Q99N15	Hsd17b10	GVIINTASVAAFEGQVGQAAYSASK	Cerebellum	—	100.0	MRM	—
Q99N15	Hsd17b10	GVIINTASVAAFEGQVGQAAYSASK	Cerebrum	—	100.0	MRM	—
Q99N15	Hsd17b10	GVIINTASVAAFEGQVGQAAYSASK	MockWholeBrain	—	100.0	MRM	—
Q99NB9	Sf3b1	SLVEIIEHGLVDEQQK	BrainStem	—	100.0	MRM	—
Q99NB9	Sf3b1	SLVEIIEHGLVDEQQK	Cerebellum	—	100.0	MRM	—
Q99NB9	Sf3b1	SLVEIIEHGLVDEQQK	Cerebrum	—	100.0	MRM	—
Q99NB9	Sf3b1	SLVEIIEHGLVDEQQK	MockWholeBrain	—	100.0	MRM	—
Q99P72	Rtn4	GVIQAIQK	BrainStem	—	100.0	MRM	—
Q99P72	Rtn4	GVIQAIQK	Cerebellum	—	100.0	MRM	—
Q99P72	Rtn4	GVIQAIQK	Cerebrum	—	100.0	MRM	—
Q99PL5	Rrbp1	DALNQATSQVESK	BrainStem	—	100.0	MRM	—
Q99PL5	Rrbp1	DALNQATSQVESK	Cerebellum	—	100.0	MRM	—
Q9CPU0	Glo1	GLAFIQDPDGYWIEILNPNK	BrainStem	—	100.0	MRM	—
Q9CPU0	Glo1	GLAFIQDPDGYWIEILNPNK	Cerebellum	—	100.0	MRM	—
Q9CPU0	Glo1	GLAFIQDPDGYWIEILNPNK	Cerebrum	—	100.0	MRM	—
Q9CPU0	Glo1	GLAFIQDPDGYWIEILNPNK	MockWholeBrain	—	100.0	MRM	—
Q9CPX6	Atg3	ALEVAEYLTPVLK	BrainStem	—	100.0	MRM	—
Q9CPX6	Atg3	ALEVAEYLTPVLK	Cerebrum	—	100.0	MRM	—
Q9CPX6	Atg3	ALEVAEYLTPVLK	MockWholeBrain	—	100.0	MRM	—
Q9CPY7	Lap3	ANKPGDVVR	BrainStem	—	100.0	MRM	—
Q9CPY7	Lap3	ANKPGDVVR	Cerebellum	—	100.0	MRM	—
Q9CPY7	Lap3	ANKPGDVVR	Cerebrum	—	100.0	MRM	—
Q9CPZ6	Ormdl3	GTPFETPDQGK	BrainStem	—	100.0	MRM	—
Q9CPZ6	Ormdl3	GTPFETPDQGK	Cerebellum	—	100.0	MRM	—
Q9CPZ6	Ormdl3	GTPFETPDQGK	Cerebrum	—	100.0	MRM	—
Q9CPZ6	Ormdl3	GTPFETPDQGK	MockWholeBrain	—	100.0	MRM	—
Q9CQ65	Mtap	EVLIETAK	BrainStem	—	100.0	MRM	—
Q9CQ65	Mtap	EVLIETAK	Cerebellum	—	100.0	MRM	—
Q9CQ65	Mtap	EVLIETAK	Cerebrum	—	100.0	MRM	—
Q9CQ86	Mien1	LENGGFPYEK	BrainStem	—	100.0	MRM	—
Q9CQ86	Mien1	LENGGFPYEK	Cerebrum	—	100.0	MRM	—
Q9CQ86	Mien1	LENGGFPYEK	MockWholeBrain	—	100.0	MRM	—
Q9CQA3	Sdhb	DLVPDLSNFYAQYK	BrainStem	—	100.0	MRM	—
Q9CQA3	Sdhb	DLVPDLSNFYAQYK	Cerebrum	—	100.0	MRM	—
Q9CQA3	Sdhb	DLVPDLSNFYAQYK	MockWholeBrain	—	100.0	MRM	—
Q9CQA3	Sdhb	SIEPYLK	BrainStem	—	100.0	MRM	—
Q9CQA9	Ntpcr	HVFLTGPPGVGK	BrainStem	—	100.0	MRM	—
Q9CQA9	Ntpcr	HVFLTGPPGVGK	Cerebellum	—	100.0	MRM	—
Q9CQA9	Ntpcr	HVFLTGPPGVGK	Cerebrum	—	100.0	MRM	—
Q9CQA9	Ntpcr	HVFLTGPPGVGK	MockWholeBrain	—	100.0	MRM	—
Q9CQI3	Gmfb	LVQTAELTK	Cerebrum	—	100.0	MRM	—
Q9CQI3	Gmfb	LVQTAELTK	MockWholeBrain	—	100.0	MRM	—
Q9CQI6	Cotl1	EVVQNFAK	BrainStem	—	100.0	MRM	—
Q9CQM9	Glrx3	YEISSVPTFLFFK	BrainStem	—	100.0	MRM	—
Q9CQM9	Glrx3	YEISSVPTFLFFK	Cerebellum	—	100.0	MRM	—
Q9CQR6	Ppp6c	VTNEFVHINNLK	BrainStem	—	100.0	MRM	—

SysQuan Mouse Database

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