SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
B9EKC5	Cabin1	VLEDTLSELAEGSEHPGSK	Cerebellum	—	100.0	None	—
B9EKE9	Ddx3x	DLLDLLVEAK	Cerebrum	—	100.0	None	—
B9EKE9	Ddx3x	SFLLDLLNATGK	Cerebrum	—	100.0	None	—
B9EKE9	Ddx3x	VGSTSENITQK	Cerebrum	—	100.0	None	—
B9EKE9	Ddx3x	YTRPTPVQK	Cerebrum	—	100.0	None	—
B9EKI3	Tmf1	AATEELLANK	BrainStem	—	100.0	None	—
B9EKI3	Tmf1	EGEISHLQLEISNLEK	BrainStem	—	100.0	None	—
B9EKI3	Tmf1	EGEISHLQLEISNLEK	Cerebellum	—	100.0	None	—
B9EKI3	Tmf1	EGEISHLQLEISNLEK	Cerebrum	—	100.0	None	—
B9EKI3	Tmf1	GYALVPIIVSPSTPK	BrainStem	—	100.0	None	—
B9EKI3	Tmf1	GYALVPIIVSPSTPK	Cerebellum	—	100.0	None	—
B9EKI3	Tmf1	GYALVPIIVSPSTPK	Cerebrum	—	100.0	None	—
B9EKI3	Tmf1	GYALVPIIVSPSTPK	MockWholeBrain	—	100.0	None	—
B9EKI3	Tmf1	LTNQNDELEEK	BrainStem	—	100.0	None	—
B9EKI3	Tmf1	LTNQNDELEEK	Cerebellum	—	100.0	None	—
B9EKI3	Tmf1	LTNQNDELEEK	Cerebrum	—	100.0	None	—
B9EKI3	Tmf1	LTNQNDELEEK	MockWholeBrain	—	100.0	None	—
B9EKI3	Tmf1	QIENLQATLGSQTSSWETLEK	BrainStem	—	100.0	None	—
B9EKI3	Tmf1	QIENLQATLGSQTSSWETLEK	Cerebrum	—	100.0	None	—
B9EKI3	Tmf1	SWFNASQLSSFAK	Cerebrum	—	100.0	None	—
B9EKI5	Cblb	ILGIIDAIQDAVGPPK	Cerebrum	—	100.0	None	—
B9EKI5	Cblb	SNIPDLGIYLK	Cerebrum	—	100.0	None	—
B9EKN8	Tnik	DITRPSRPADLTALAK	BrainStem	—	100.0	None	—
B9EKN8	Tnik	DITRPSRPADLTALAK	Cerebellum	—	100.0	None	—
B9EKN8	Tnik	DITRPSRPADLTALAK	Cerebrum	—	100.0	None	—
B9EKN8	Tnik	DITRPSRPADLTALAK	MockWholeBrain	—	100.0	None	—
B9EKP7	Pdzrn4	TDDEEDTGIYVSEVDPNSIAAK	Cerebrum	—	100.0	None	—
B9EKR1	Ptprz1	ALSILFEVGVEENLDYK	BrainStem	—	100.0	None	—
B9EKR1	Ptprz1	ALSILFEVGVEENLDYK	MockWholeBrain	—	100.0	None	—
B9EKR1	Ptprz1	ASLENTFIHNTGK	BrainStem	—	100.0	None	—
B9EKR1	Ptprz1	ASLENTFIHNTGK	Cerebrum	—	100.0	None	—
B9EKR1	Ptprz1	AYIAAQGPLK	BrainStem	—	100.0	None	—
B9EKR1	Ptprz1	ETEVPDSHIHSYVNTLLIPGPTGK	BrainStem	—	100.0	None	—
B9EKR1	Ptprz1	ETEVPDSHIHSYVNTLLIPGPTGK	Cerebellum	—	100.0	None	—
B9EKR1	Ptprz1	ETEVPDSHIHSYVNTLLIPGPTGK	Cerebrum	—	100.0	None	—
B9EKR1	Ptprz1	ETEVPDSHIHSYVNTLLIPGPTGK	MockWholeBrain	—	100.0	None	—
B9EKR1	Ptprz1	EVSADVSEEENFLTDFK	BrainStem	—	100.0	None	—
B9EKR1	Ptprz1	EVSADVSEEENFLTDFK	Cerebellum	—	100.0	None	—
B9EKR1	Ptprz1	EVSADVSEEENFLTDFK	Cerebellum	—	100.0	None	—
B9EKR1	Ptprz1	EVSADVSEEENFLTDFK	Cerebrum	—	100.0	None	—
B9EKR1	Ptprz1	EVSADVSEEENFLTDFK	MockWholeBrain	—	100.0	None	—
B9EKR1	Ptprz1	FSEQGLLK	Cerebrum	—	100.0	None	—
B9EKR1	Ptprz1	FSSFEEAVK	Cerebellum	—	100.0	None	—
B9EKR1	Ptprz1	IGLAEGLESEK	BrainStem	—	100.0	None	—
B9EKR1	Ptprz1	IGLAEGLESEK	Cerebellum	—	100.0	None	—
B9EKR1	Ptprz1	IGLAEGLESEK	MockWholeBrain	—	100.0	None	—
B9EKR1	Ptprz1	ITFHWGK	Cerebrum	—	100.0	None	—
B9EKR1	Ptprz1	LLLPSTATSK	BrainStem	—	100.0	None	—
B9EKR1	Ptprz1	LLLPSTATSK	Cerebellum	—	100.0	None	—
B9EKR1	Ptprz1	LTDYINANYVDGYNRPK	BrainStem	—	100.0	None	—

SysQuan Mouse Database

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