SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
B2RY79	Dock9	TYNSDWHLVTYK	Cerebellum	—	100.0	None	—
B2RY79	Dock9	WVEGGKPLLK	Cerebellum	—	100.0	None	—
B2RY79	Dock9	WVEGGKPLLK	Cerebrum	—	100.0	None	—
B2RY79	Dock9	YELIADIYK	Cerebellum	—	100.0	None	—
B2Z893	Pfkfb2	DKPTEVENLLAEHR	Cerebellum	—	100.0	None	—
B2Z893	Pfkfb2	DKPTEVENLLAEHR	MockWholeBrain	—	100.0	None	—
B3DFI9	Ubr3	EVEELQGRPGAFPVSISSETNLSK	BrainStem	—	100.0	None	—
B3DFI9	Ubr3	EVEELQGRPGAFPVSISSETNLSK	Cerebrum	—	100.0	None	—
B3V097	Cstf2	IVDPEIALK	BrainStem	—	100.0	None	—
B3V097	Cstf2	QSILILK	Cerebellum	—	100.0	None	—
B3V097	Cstf2	QSILILK	Cerebrum	—	100.0	None	—
B3V097	Cstf2	QSILILK	MockWholeBrain	—	100.0	None	—
B3V097	Cstf2	SLGTGAPVIESPYGESISPEDAPESISK	BrainStem	—	100.0	None	—
B3V097	Cstf2	SLGTGAPVIESPYGESISPEDAPESISK	Cerebellum	—	100.0	None	—
B3V097	Cstf2	SLGTGAPVIESPYGESISPEDAPESISK	Cerebrum	—	100.0	None	—
B3V097	Cstf2	SLGTGAPVIESPYGESISPEDAPESISK	MockWholeBrain	—	100.0	None	—
B3V097	Cstf2	SVFVGNIPYEATEEQLK	Cerebellum	—	100.0	None	—
B3V097	Cstf2	SVFVGNIPYEATEEQLK	Cerebrum	—	100.0	None	—
B5B2N2	Nfatc1	FTYLPANVPIIK	Cerebellum	—	100.0	None	—
B5B2N2	Nfatc1	FTYLPANVPIIK	Cerebrum	—	100.0	None	—
B5B2N2	Nfatc1	FTYLPANVPIIK	MockWholeBrain	—	100.0	None	—
B5THE3	Sis	EILTIELK	Cerebellum	—	100.0	None	—
B5TVM2	Ildr2	DLSFHSNSEK	Cerebrum	—	100.0	None	—
B5TVM2	Ildr2	EITIVHDADLQIGK	BrainStem	—	100.0	None	—
B5TVM2	Ildr2	EITIVHDADLQIGK	Cerebrum	—	100.0	None	—
B5TVM2	Ildr2	EITIVHDADLQIGK	MockWholeBrain	—	100.0	None	—
B5TVM2	Ildr2	VLYYVEK	Cerebrum	—	100.0	None	—
B5TVM2	Ildr2	VLYYVEK	MockWholeBrain	—	100.0	None	—
B5X0G2	Mup17	EPDLSSDIK	BrainStem	—	100.0	None	—
B5X0G2	Mup17	LFLEQIHVLENSLVLK	BrainStem	—	100.0	None	—
B6ZHC5	Epb41l2	EVENEQTPVSEPEEEK	BrainStem	—	100.0	None	—
B6ZHC5	Epb41l2	FLTLGSK	Cerebrum	—	100.0	None	—
B6ZHC5	Epb41l2	GLSPAQADSQFLENAK	BrainStem	—	100.0	None	—
B6ZHC5	Epb41l2	SSHETLNVVEEK	BrainStem	—	100.0	None	—
B6ZHD0	Epb41l2	ATPLPAEGK	Cerebrum	—	100.0	None	—
B6ZHD0	Epb41l2	EPTQADVEDQILGK	Cerebrum	—	100.0	None	—
B6ZHD0	Epb41l2	LVSPEQPPK	Cerebrum	—	100.0	None	—
B6ZHD0	Epb41l2	QAGASVLPVETEAQEHVVAQK	Cerebrum	—	100.0	None	—
B7Z217	—	YIETSAHYEENK	Cerebellum	—	100.0	None	—
B7Z3H2	nan	GLQLLSK	BrainStem	—	100.0	None	—
B7Z3H2	—	YIETSAHYEENK	BrainStem	—	100.0	None	—
B7Z3H2	nan	YIETSAHYEENK	MockWholeBrain	—	100.0	None	—
B7Z3H2	nan	YNYTSEEK	BrainStem	—	100.0	None	—
B7Z3H2	nan	YQILNNEVFAILNK	BrainStem	—	100.0	None	—
B7ZBW2	Kcnq2	DGALLIAGSEAPK	BrainStem	—	100.0	None	—
B7ZBW2	Kcnq2	DGALLIAGSEAPK	Cerebellum	—	100.0	None	—
B7ZBW2	Kcnq2	QNSEASLPGEDIVEDNK	BrainStem	—	100.0	None	—
B7ZBW2	Kcnq2	QNSEASLPGEDIVEDNK	Cerebellum	—	100.0	None	—
B7ZBW2	Kcnq2	QNSEASLPGEDIVEDNK	Cerebrum	—	100.0	None	—
B7ZBW2	Kcnq2	QNSEASLPGEDIVEDNK	MockWholeBrain	—	100.0	None	—

SysQuan Mouse Database

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