SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
B2RXX0	Nek1	NSLLIGLSTGLFDANNPK	BrainStem	—	100.0	None	—
B2RXX0	Nek1	SLLSQLFK	BrainStem	—	100.0	None	—
B2RXX0	Nek1	SSDVPLPLELLETGGSPSK	BrainStem	—	100.0	None	—
B2RXX0	Nek1	SSDVPLPLELLETGGSPSK	MockWholeBrain	—	100.0	None	—
B2RXX8	Cdc42bpa	EFSGGSYNTK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	EGIHASEIK	BrainStem	—	100.0	None	—
B2RXX8	Cdc42bpa	EGIHASEIK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	ELEVHTEALIAEASK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	ELHDSEGQQLALNK	BrainStem	—	100.0	None	—
B2RXX8	Cdc42bpa	ELHDSEGQQLALNK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	GPLGIDPQK	BrainStem	—	100.0	None	—
B2RXX8	Cdc42bpa	GPLGIDPQK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	IALGNEEGLFVVHVTK	BrainStem	—	100.0	None	—
B2RXX8	Cdc42bpa	IALGNEEGLFVVHVTK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	IPKPAGVK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	LGQNGIEDFK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	LQESTQTVQALQYSTVDGPLTASK	BrainStem	—	100.0	None	—
B2RXX8	Cdc42bpa	LQESTQTVQALQYSTVDGPLTASK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	LTELHTQK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	NQHLEEEVK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	QAIQEELNK	BrainStem	—	100.0	None	—
B2RXX8	Cdc42bpa	QAIQEELNK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	QLENELEGLK	BrainStem	—	100.0	None	—
B2RXX8	Cdc42bpa	QLENELEGLK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	SIFYEEEISK	BrainStem	—	100.0	None	—
B2RXX8	Cdc42bpa	SIFYEEEISK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	THQFFVK	BrainStem	—	100.0	None	—
B2RXX8	Cdc42bpa	VTASQLSAPSNK	BrainStem	—	100.0	None	—
B2RXX8	Cdc42bpa	VTASQLSAPSNK	Cerebellum	—	100.0	None	—
B2RXX8	Cdc42bpa	WVGVLSELHK	Cerebellum	—	100.0	None	—
B2RY03	Synpo2	APPPVAYNPIHSPSYPLAAIK	BrainStem	—	100.0	None	—
B2RY03	Synpo2	VSPNPELLSLLQNAEGK	BrainStem	—	100.0	None	—
B2RY03	Synpo2	VSPNPELLSLLQNAEGK	Cerebellum	—	100.0	None	—
B2RY04	Dock5	AFGVAFVK	BrainStem	—	100.0	None	—
B2RY04	Dock5	AFGVAFVK	Cerebellum	—	100.0	None	—
B2RY04	Dock5	AFGVAFVK	Cerebrum	—	100.0	None	—
B2RY04	Dock5	AFGVAFVK	MockWholeBrain	—	100.0	None	—
B2RY04	Dock5	AIHPGAGYEGVSEYK	BrainStem	—	100.0	None	—
B2RY04	Dock5	AIHPGAGYEGVSEYK	Cerebellum	—	100.0	None	—
B2RY04	Dock5	AINQFAEVLTK	Cerebellum	—	100.0	None	—
B2RY04	Dock5	AINQFAEVLTK	MockWholeBrain	—	100.0	None	—
B2RY04	Dock5	ALFYENIIK	BrainStem	—	100.0	None	—
B2RY04	Dock5	ALFYENIIK	Cerebellum	—	100.0	None	—
B2RY04	Dock5	ALFYENIIK	Cerebrum	—	100.0	None	—
B2RY04	Dock5	DKPVPEQILNYYR	BrainStem	—	100.0	None	—
B2RY04	Dock5	DKPVPEQILNYYR	Cerebellum	—	100.0	None	—
B2RY04	Dock5	DKPVPEQILNYYR	MockWholeBrain	—	100.0	None	—
B2RY04	Dock5	DSYYVYTQQELK	BrainStem	—	100.0	None	—
B2RY04	Dock5	DSYYVYTQQELK	Cerebrum	—	100.0	None	—
B2RY04	Dock5	GIFPETYIHLK	BrainStem	—	100.0	None	—

SysQuan Mouse Database

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