SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q91VD9	Ndufs1	IASQVAALDLGYKPGVEAIR	Cerebrum	—	100.0	MRM	—
Q91VH6	Memo1	IYGELWK	BrainStem	—	100.0	MRM	—
Q91VU0	Fam3c	SPFEQHIK	BrainStem	—	100.0	MRM	—
Q91VU0	Fam3c	SPFEQHIK	Cerebellum	—	100.0	MRM	—
Q91VU0	Fam3c	SPFEQHIK	Cerebrum	—	100.0	MRM	—
Q91VU0	Fam3c	SPFEQHIK	MockWholeBrain	—	100.0	MRM	—
Q91W43	Gldc	AGHQLQHDLFFDTLK	BrainStem	—	100.0	MRM	—
Q91W43	Gldc	AGHQLQHDLFFDTLK	Cerebellum	—	100.0	MRM	—
Q91W43	Gldc	EVAAFPLPFVKPENK	BrainStem	—	100.0	MRM	—
Q91W43	Gldc	EVAAFPLPFVKPENK	Cerebellum	—	100.0	MRM	—
Q91W43	Gldc	EVAAFPLPFVKPENK	Cerebrum	—	100.0	MRM	—
Q91W43	Gldc	EVAAFPLPFVKPENK	MockWholeBrain	—	100.0	MRM	—
Q91WD5	Ndufs2	LYTEGYQVPPGATYTAIEAPK	BrainStem	—	100.0	MRM	—
Q91WD5	Ndufs2	LYTEGYQVPPGATYTAIEAPK	Cerebrum	—	100.0	MRM	—
Q91WD5	Ndufs2	LYTEGYQVPPGATYTAIEAPK	MockWholeBrain	—	100.0	MRM	—
Q91WG8	Gne	ILQALHLQFGK	BrainStem	—	100.0	MRM	—
Q91WG8	Gne	ILQALHLQFGK	Cerebellum	—	100.0	MRM	—
Q91WG8	Gne	ILQALHLQFGK	Cerebrum	—	100.0	MRM	—
Q91WG8	Gne	ILQALHLQFGK	MockWholeBrain	—	100.0	MRM	—
Q91WG8	Gne	SIDLQEPLQK	BrainStem	—	100.0	MRM	—
Q91WG8	Gne	SIDLQEPLQK	Cerebellum	—	100.0	MRM	—
Q91WG8	Gne	SIDLQEPLQK	Cerebrum	—	100.0	MRM	—
Q91WG8	Gne	SIDLQEPLQK	MockWholeBrain	—	100.0	MRM	—
Q91XU3	Pip4k2c	DVEFLVQLK	BrainStem	—	100.0	MRM	—
Q91XU3	Pip4k2c	DVEFLVQLK	Cerebellum	—	100.0	MRM	—
Q91XU3	Pip4k2c	DVEFLVQLK	Cerebrum	—	100.0	MRM	—
Q91XU3	Pip4k2c	DVEFLVQLK	MockWholeBrain	—	100.0	MRM	—
Q91YH5	Atl3	YQQELEEEIK	BrainStem	—	100.0	MRM	—
Q91YH5	Atl3	YQQELEEEIK	Cerebellum	—	100.0	MRM	—
Q91YH5	Atl3	YQQELEEEIK	Cerebrum	—	100.0	MRM	—
Q91YH5	Atl3	YQQELEEEIK	MockWholeBrain	—	100.0	MRM	—
Q91YL3	Uckl1	DIEGVIK	BrainStem	—	100.0	MRM	—
Q91YL3	Uckl1	DIEGVIK	Cerebellum	—	100.0	MRM	—
Q91YL3	Uckl1	DIEGVIK	Cerebrum	—	100.0	MRM	—
Q91YN5	Uap1	DVVNVYEPQLQHHVAQK	BrainStem	—	100.0	MRM	—
Q91YN5	Uap1	DVVNVYEPQLQHHVAQK	Cerebellum	—	100.0	MRM	—
Q91YN5	Uap1	DVVNVYEPQLQHHVAQK	MockWholeBrain	—	100.0	MRM	—
Q91YN5	Uap1	FVFDIFQFAK	BrainStem	—	100.0	MRM	—
Q91YN5	Uap1	FVFDIFQFAK	Cerebellum	—	100.0	MRM	—
Q91YN5	Uap1	FVFDIFQFAK	MockWholeBrain	—	100.0	MRM	—
Q91YQ5	Rpn1	DISTLNSGK	BrainStem	—	100.0	MRM	—
Q91YQ5	Rpn1	DISTLNSGK	Cerebrum	—	100.0	MRM	—
Q91YQ5	Rpn1	FPLFGGWK	BrainStem	—	100.0	MRM	—
Q91YQ5	Rpn1	FPLFGGWK	Cerebellum	—	100.0	MRM	—
Q91YQ5	Rpn1	FPLFGGWK	Cerebrum	—	100.0	MRM	—
Q91YQ5	Rpn1	FVDHVFDEQVIDSLTVK	BrainStem	—	100.0	MRM	—
Q91YQ5	Rpn1	FVDHVFDEQVIDSLTVK	Cerebellum	—	100.0	MRM	—
Q91YQ5	Rpn1	FVDHVFDEQVIDSLTVK	Cerebrum	—	100.0	MRM	—
Q91YQ5	Rpn1	IILPEGAK	BrainStem	—	100.0	MRM	—
Q91YQ5	Rpn1	IILPEGAK	MockWholeBrain	—	100.0	MRM	—

SysQuan Mouse Database

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