SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
A0A991ENV6	Sfpq	YGEPGEVFINK	Cerebellum	—	100.0	MRM	—
A0AA74KSY4	Hdgf	LVIDEPAK	Cerebellum	—	100.0	MRM	—
A0AA74KSY4	Hdgf	LVIDEPAK	Cerebrum	—	100.0	MRM	—
A0AA74KSY4	Hdgf	LVIDEPAK	MockWholeBrain	—	100.0	MRM	—
A0AA74KSY4	Hdgf	YQVFFFGTHETAFLGPK	Cerebellum	—	100.0	MRM	—
A0AA74KSY4	Hdgf	YQVFFFGTHETAFLGPK	Cerebrum	—	100.0	MRM	—
A0AA74KSY4	Hdgf	YQVFFFGTHETAFLGPK	MockWholeBrain	—	100.0	MRM	—
A0AAQ4VMQ7	Pcbp2	GVTIPYRPK	BrainStem	—	100.0	MRM	—
A0AAQ4VMQ7	Pcbp2	GVTIPYRPK	Cerebrum	—	100.0	MRM	—
A0AAQ4VMQ7	Pcbp2	IITLAGPTNAIFK	Cerebellum	—	100.0	MRM	—
A0AAQ4VMQ7	Pcbp2	IITLAGPTNAIFK	Cerebrum	—	100.0	MRM	—
A0AAQ4VMY5	Rps6ka2	YGQHPNIITLK	BrainStem	—	100.0	MRM	—
A0AAQ4VMY5	Rps6ka2	YGQHPNIITLK	Cerebrum	—	100.0	MRM	—
A0JNY3	Gphn	ASHSAVDITK	Cerebellum	—	100.0	MRM	—
A0JNY3	Gphn	ASHSAVDITK	Cerebrum	—	100.0	MRM	—
A0JNY3	Gphn	DLVQDPSLLGGTISAYK	Cerebellum	—	100.0	MRM	—
A0JNY3	Gphn	IVPDEIEEIK	Cerebellum	—	100.0	MRM	—
A0JNY3	Gphn	VLAQDVYAK	Cerebrum	—	100.0	MRM	—
A0JNY7	Eif4g2	LDLIHESILHK	Cerebellum	—	100.0	MRM	—
A0JNY7	Eif4g2	LDLIHESILHK	MockWholeBrain	—	100.0	MRM	—
A1A4T2	Ganab	LVAIVDPHIK	Cerebellum	—	100.0	MRM	—
A1A4T2	Ganab	LVAIVDPHIK	Cerebrum	—	100.0	MRM	—
A1BN54	Actn1	LLETIDQLYLEYAK	Cerebrum	—	100.0	MRM	—
A2A432	Cul4b	EAVEAIQNSTSIK	BrainStem	—	100.0	MRM	—
A2A432	Cul4b	EAVEAIQNSTSIK	Cerebrum	—	100.0	MRM	—
A2A7S7	Yars1	NLQEVLGEEK	BrainStem	—	100.0	MRM	—
A2A7S7	Yars1	NLQEVLGEEK	Cerebrum	—	100.0	MRM	—
A2A7S7	Yars1	TVVSGLVQFVPK	BrainStem	—	100.0	MRM	—
A2A7S7	Yars1	TVVSGLVQFVPK	Cerebellum	—	100.0	MRM	—
A2A848	Acox1	EIGTHKPLPGITVGDIGPK	BrainStem	—	100.0	MRM	—
A2A848	Acox1	EIGTHKPLPGITVGDIGPK	Cerebellum	—	100.0	MRM	—
A2A848	Acox1	EIGTHKPLPGITVGDIGPK	Cerebrum	—	100.0	MRM	—
A2A848	Acox1	EIGTHKPLPGITVGDIGPK	MockWholeBrain	—	100.0	MRM	—
A2A848	Acox1	YDGNVYENLFEWAK	Cerebellum	—	100.0	MRM	—
A2A848	Acox1	YDGNVYENLFEWAK	Cerebrum	—	100.0	MRM	—
A2A848	Acox1	YDGNVYENLFEWAK	liver	—	100.0	MRM	—
A2A9Q2	Nrdc	IEEFLSSFEEK	Cerebellum	—	100.0	MRM	—
A2ABY3	Pcyt2	DTYEEVK	BrainStem	—	100.0	MRM	—
A2ABY3	Pcyt2	DTYEEVK	Cerebellum	—	100.0	MRM	—
A2AFQ2	Hsd17b10	GVIINTASVAAFEGQVGQAAYSASK	BrainStem	—	100.0	MRM	—
A2AFQ2	Hsd17b10	GVIINTASVAAFEGQVGQAAYSASK	Cerebrum	—	100.0	MRM	—
A2AH25	Arhgap1	HQIVEVAGDDK	BrainStem	—	100.0	MRM	—
A2AH25	Arhgap1	HQIVEVAGDDK	Cerebellum	—	100.0	MRM	—
A2AHJ7	Dgkz	TLLHHAVSTGSK	BrainStem	—	100.0	MRM	—
A2AHJ7	Dgkz	TLLHHAVSTGSK	Cerebellum	—	100.0	MRM	—
A2AHJ7	Dgkz	TLLHHAVSTGSK	Cerebrum	—	100.0	MRM	—
A2AHJ7	Dgkz	TLLHHAVSTGSK	MockWholeBrain	—	100.0	MRM	—
A2AIM4	Tpm2	TIDDLEDEVYAQK	BrainStem	—	100.0	MRM	—
A2AIM4	Tpm2	TIDDLEDEVYAQK	Cerebellum	—	100.0	MRM	—
A2AIM4	Tpm2	TIDDLEDEVYAQK	Cerebrum	—	100.0	MRM	—

SysQuan Mouse Database

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