SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
B1AY13	Usp24	VLYNLEVLSSK	Cerebellum	—	100.0	None	—
B1AY13	Usp24	VSDQNSPVLPK	Cerebellum	—	100.0	None	—
B1AYL1	Scn7a	GLVPFTTESLELIENHIAK	BrainStem	—	100.0	None	—
B1AYL1	Scn7a	LLYADVQKPTPR	BrainStem	—	100.0	None	—
B1AYL1	Scn7a	LLYADVQKPTPR	MockWholeBrain	—	100.0	None	—
B1AZ14	Cobll1	AETSPPPVAAKPVALPGSQGTSLNLK	Cerebellum	—	100.0	None	—
B1AZ14	Cobll1	DYQAQEPLDLTK	Cerebellum	—	100.0	None	—
B1AZ14	Cobll1	PVALPGSQGTSLNLK	BrainStem	—	100.0	None	—
B1AZ14	Cobll1	PVALPGSQGTSLNLK	Cerebellum	—	100.0	None	—
B1AZ14	Cobll1	PVALPGSQGTSLNLK	Cerebrum	—	100.0	None	—
B1AZ14	Cobll1	TGSLQLSSTSIGTSSLK	Cerebrum	—	100.0	None	—
B1AZ14	Cobll1	THSAPLPNISK	Cerebellum	—	100.0	None	—
B1AZ14	Cobll1	VTTDTGTIPFAPNLEDINNILESK	BrainStem	—	100.0	None	—
B1AZA5	Tmem245	DISEDLK	BrainStem	—	100.0	None	—
B1AZA5	Tmem245	DISEDLK	Cerebellum	—	100.0	None	—
B1AZA5	Tmem245	DISEDLK	Cerebrum	—	100.0	None	—
B1AZA5	Tmem245	DISEDLK	MockWholeBrain	—	100.0	None	—
B1AZA5	Tmem245	GVFDASLK	BrainStem	—	100.0	None	—
B1AZA5	Tmem245	GVFDASLK	Cerebrum	—	100.0	None	—
B1AZA5	Tmem245	GVFDASLK	MockWholeBrain	—	100.0	None	—
B1AZA5	Tmem245	QEALAPWPIIGLGK	BrainStem	—	100.0	None	—
B1AZA5	Tmem245	QEALAPWPIIGLGK	Cerebellum	—	100.0	None	—
B1AZA5	Tmem245	QEALAPWPIIGLGK	Cerebrum	—	100.0	None	—
B1AZA5	Tmem245	QEALAPWPIIGLGK	MockWholeBrain	—	100.0	None	—
B1AZI6	Thoc2	AAAAVVVPAEWIK	BrainStem	—	100.0	None	—
B1AZI6	Thoc2	AAAAVVVPAEWIK	Cerebellum	—	100.0	None	—
B1AZI6	Thoc2	AAAAVVVPAEWIK	Cerebrum	—	100.0	None	—
B1AZI6	Thoc2	AAAAVVVPAEWIK	MockWholeBrain	—	100.0	None	—
B1AZI6	Thoc2	DNWLLAK	Cerebellum	—	100.0	None	—
B1AZI6	Thoc2	DNWLLAK	Cerebrum	—	100.0	None	—
B1AZI6	Thoc2	FVELVHQQK	BrainStem	—	100.0	None	—
B1AZI6	Thoc2	FVELVHQQK	Cerebellum	—	100.0	None	—
B1AZI6	Thoc2	FVELVHQQK	Cerebrum	—	100.0	None	—
B1AZI6	Thoc2	FVELVHQQK	MockWholeBrain	—	100.0	None	—
B1AZI6	Thoc2	GSPVSALQNK	BrainStem	—	100.0	None	—
B1AZI6	Thoc2	GSPVSALQNK	Cerebellum	—	100.0	None	—
B1AZI6	Thoc2	GSPVSALQNK	Cerebrum	—	100.0	None	—
B1AZI6	Thoc2	ILPWYPK	Cerebrum	—	100.0	None	—
B1AZI6	Thoc2	LDPETLESLGLIK	BrainStem	—	100.0	None	—
B1AZI6	Thoc2	LDPETLESLGLIK	Cerebellum	—	100.0	None	—
B1AZI6	Thoc2	LDPETLESLGLIK	Cerebrum	—	100.0	None	—
B1AZI6	Thoc2	LDPETLESLGLIK	MockWholeBrain	—	100.0	None	—
B1AZI6	Thoc2	LGLLEALLK	BrainStem	—	100.0	None	—
B1AZI6	Thoc2	LGLLEALLK	Cerebellum	—	100.0	None	—
B1AZI6	Thoc2	LGLLEALLK	Cerebrum	—	100.0	None	—
B1AZI6	Thoc2	LGLLEALLK	MockWholeBrain	—	100.0	None	—
B1AZI6	Thoc2	NAVASVQNGPGGGTSSSSIGNASK	Cerebrum	—	100.0	None	—
B1AZI6	Thoc2	NILIVLTK	Cerebrum	—	100.0	None	—
B1AZI6	Thoc2	SFDLLILK	BrainStem	—	100.0	None	—
B1AZI6	Thoc2	SFDLLILK	Cerebellum	—	100.0	None	—

SysQuan Mouse Database

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