SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
B1ASU0	Il1rapl1	TTELTVTAPLTDKPPK	Cerebrum	—	100.0	None	—
B1ASU0	Il1rapl1	TTELTVTAPLTDKPPK	MockWholeBrain	—	100.0	None	—
B1ASU9	Tlk2	KPFGHNQSQQDILQENTILK	Cerebellum	—	100.0	None	—
B1AT82	Prpsap1	EKPPITVVGDVGGR	BrainStem	—	100.0	None	—
B1AT82	Prpsap1	LIEESPIDEVVVTNTVPHELQK	Cerebellum	—	100.0	None	—
B1AT82	Prpsap1	NIIGVIPYFPYSK	BrainStem	—	100.0	None	—
B1AT82	Prpsap1	NIIGVIPYFPYSK	Cerebellum	—	100.0	None	—
B1AT82	Prpsap1	NIIGVIPYFPYSK	Cerebrum	—	100.0	None	—
B1AT82	Prpsap1	NIIGVIPYFPYSK	MockWholeBrain	—	100.0	None	—
B1ATD4	Mtmr3	ASEQPAGFDTLQK	Cerebellum	—	100.0	None	—
B1ATD4	Mtmr3	ENVAPAVPVDAK	Cerebrum	—	100.0	None	—
B1ATD4	Mtmr3	TPQIVALAK	BrainStem	—	100.0	None	—
B1ATD4	Mtmr3	TPQIVALAK	Cerebellum	—	100.0	None	—
B1ATD4	Mtmr3	TPQIVALAK	Cerebrum	—	100.0	None	—
B1ATS5	Atp2a3	ALGVAVATGLQTELGK	Cerebellum	—	100.0	None	—
B1ATS5	Atp2a3	DIVPGDIVEVAVGDK	Cerebellum	—	100.0	None	—
B1ATU4	Gps1	VSVYLQNWSHVLSYVSK	BrainStem	—	100.0	None	—
B1AUB9	Nfia	EDFVLTVTGK	Cerebrum	—	100.0	None	—
B1AUB9	Nfia	SLPSTSSTSSTK	BrainStem	—	100.0	None	—
B1AUB9	Nfia	SLPSTSSTSSTK	Cerebrum	—	100.0	None	—
B1AUB9	Nfia	YHPQETLK	Cerebrum	—	100.0	None	—
B1AUC0	Nfia	DELLSEKPEVK	Cerebellum	—	100.0	None	—
B1AUC0	Nfia	SPGSGSQSSGWHEVEPGLPSPSTLK	Cerebellum	—	100.0	None	—
B1AUC0	Nfia	YHPQETLK	Cerebellum	—	100.0	None	—
B1AUE5	Pex10	SAAGEALHSLAGAK	BrainStem	—	100.0	None	—
B1AUE5	Pex10	SAAGEALHSLAGAK	Cerebellum	—	100.0	None	—
B1AUE5	Pex10	SAAGEALHSLAGAK	Cerebrum	—	100.0	None	—
B1AUF1	Ski	FLHEVVK	Cerebellum	—	100.0	None	—
B1AUF1	Ski	SFETAVAPNVALAPPTQQK	Cerebrum	—	100.0	None	—
B1AUF1	Ski	YSAQIEDLQAK	Cerebellum	—	100.0	None	—
B1AUH1	Ptpru	GAGVSNFAELIVK	Cerebrum	—	100.0	None	—
B1AUN2	Eif2b3	DFIGVDSTGK	Cerebellum	—	100.0	None	—
B1AUN2	Eif2b3	DFIGVDSTGK	Cerebrum	—	100.0	None	—
B1AUN2	Eif2b3	GQESIEPVPGQK	Cerebellum	—	100.0	None	—
B1AUN2	Eif2b3	HLIGADSLIGPDTQIGEK	BrainStem	—	100.0	None	—
B1AUN2	Eif2b3	HLIGADSLIGPDTQIGEK	Cerebellum	—	100.0	None	—
B1AUN2	Eif2b3	HLIGADSLIGPDTQIGEK	MockWholeBrain	—	100.0	None	—
B1AUN2	Eif2b3	PLLPVGNKPLIWYPLNLLER	BrainStem	—	100.0	None	—
B1AUN2	Eif2b3	SLDIYSFIK	BrainStem	—	100.0	None	—
B1AUN2	Eif2b3	SLDIYSFIK	Cerebrum	—	100.0	None	—
B1AUN2	Eif2b3	SLDIYSFIK	MockWholeBrain	—	100.0	None	—
B1AUN2	Eif2b3	VGFEEVIVVTTK	BrainStem	—	100.0	None	—
B1AUN2	Eif2b3	VGFEEVIVVTTK	Cerebrum	—	100.0	None	—
B1AUW6	Irak1	AIQFLHQDSPSLIHGDIK	BrainStem	—	100.0	None	—
B1AUW6	Irak1	AIQFLHQDSPSLIHGDIK	Cerebellum	—	100.0	None	—
B1AUW6	Irak1	DLIEDEAEEAGVTLK	BrainStem	—	100.0	None	—
B1AUW6	Irak1	DLIEDEAEEAGVTLK	MockWholeBrain	—	100.0	None	—
B1AUW6	Irak1	GTLAYLPEEYIK	BrainStem	—	100.0	None	—
B1AUW6	Irak1	GTLAYLPEEYIK	MockWholeBrain	—	100.0	None	—
B1AVN9	Phactr2	GELSDTGIESLTPEETVAGAEEQATSK	Cerebellum	—	100.0	None	—

SysQuan Mouse Database

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