SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
B1AR17	Chd3	ELQGDGPPSSPTNDPTVK	MockWholeBrain	—	100.0	None	—
B1AR17	Chd3	ENEFSFEDNAIK	BrainStem	—	100.0	None	—
B1AR17	Chd3	ENEFSFEDNAIK	Cerebellum	—	100.0	None	—
B1AR17	Chd3	ENEFSFEDNAIK	Cerebrum	—	100.0	None	—
B1AR17	Chd3	ENEFSFEDNAIK	MockWholeBrain	—	100.0	None	—
B1AR17	Chd3	ESLAGNKPANAVLHK	Cerebellum	—	100.0	None	—
B1AR17	Chd3	ESLAGNKPANAVLHK	Cerebrum	—	100.0	None	—
B1AR17	Chd3	ESLAGNKPANAVLHK	MockWholeBrain	—	100.0	None	—
B1AR17	Chd3	LLPSALGVK	Cerebellum	—	100.0	None	—
B1AR17	Chd3	LLPSALGVK	Cerebrum	—	100.0	None	—
B1AR17	Chd3	LPSGAYEGGALIK	Cerebrum	—	100.0	None	—
B1AR74	Bcas3	DVVGSGTDTALDVAVK	BrainStem	—	100.0	None	—
B1AR74	Bcas3	DVVGSGTDTALDVAVK	Cerebellum	—	100.0	None	—
B1ART1	Vps13d	EAIFLEVK	Cerebrum	—	100.0	None	—
B1ART1	Vps13d	EAIFLEVK	MockWholeBrain	—	100.0	None	—
B1ART1	Vps13d	EFIINDILK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	EFIINDILK	Cerebrum	—	100.0	None	—
B1ART1	Vps13d	ELELPFEVK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	ELELPFEVK	Cerebellum	—	100.0	None	—
B1ART1	Vps13d	ELELPFEVK	Cerebrum	—	100.0	None	—
B1ART1	Vps13d	ELELPFEVK	MockWholeBrain	—	100.0	None	—
B1ART1	Vps13d	FTTSGEEALIFQTFK	Cerebellum	—	100.0	None	—
B1ART1	Vps13d	FTTSGEEALIFQTFK	MockWholeBrain	—	100.0	None	—
B1ART1	Vps13d	FTVQIEEK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	FTVQIEEK	Cerebrum	—	100.0	None	—
B1ART1	Vps13d	FVNPVQVVLAK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	FVNPVQVVLAK	Cerebellum	—	100.0	None	—
B1ART1	Vps13d	FVNPVQVVLAK	Cerebrum	—	100.0	None	—
B1ART1	Vps13d	FVNPVQVVLAK	MockWholeBrain	—	100.0	None	—
B1ART1	Vps13d	GLVGTVTKPVAGALDFASETAQAVR	BrainStem	—	100.0	None	—
B1ART1	Vps13d	IEEEQSFEELK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	IEEEQSFEELK	Cerebellum	—	100.0	None	—
B1ART1	Vps13d	IEEEQSFEELK	Cerebrum	—	100.0	None	—
B1ART1	Vps13d	IEEEQSFEELK	MockWholeBrain	—	100.0	None	—
B1ART1	Vps13d	IFISAPYWLINK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	ISIPQIK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	ISIPQIK	Cerebellum	—	100.0	None	—
B1ART1	Vps13d	ISIPQIK	MockWholeBrain	—	100.0	None	—
B1ART1	Vps13d	LLYESFSNQTK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	LLYESFSNQTK	Cerebellum	—	100.0	None	—
B1ART1	Vps13d	LLYESFSNQTK	Cerebrum	—	100.0	None	—
B1ART1	Vps13d	PLNIIYNPQAIK	MockWholeBrain	—	100.0	None	—
B1ART1	Vps13d	SDFVPSASIK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	SNNLIVANLGK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	SNNLIVANLGK	Cerebellum	—	100.0	None	—
B1ART1	Vps13d	SSYEVEELPVTEQELQK	BrainStem	—	100.0	None	—
B1ART1	Vps13d	SSYEVEELPVTEQELQK	Cerebellum	—	100.0	None	—
B1ART1	Vps13d	SSYEVEELPVTEQELQK	Cerebrum	—	100.0	None	—
B1ART1	Vps13d	SSYEVEELPVTEQELQK	MockWholeBrain	—	100.0	None	—
B1ART1	Vps13d	TEGGVSGFISGLGK	Cerebellum	—	100.0	None	—

SysQuan Mouse Database

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