SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
A6P3E4	Mapk8	NIIGLLNVFTPQK	BrainStem	—	100.0	None	—
A6P3E4	Mapk8	NIIGLLNVFTPQK	Cerebellum	—	100.0	None	—
A6PW28	Ripor2	EFQDLNQEVTHLDDVLK	Cerebrum	—	100.0	None	—
A6PW47	Med24	FINLNEFTTHGSGESTK	Cerebrum	—	100.0	None	—
A6PW47	Med24	SLDLLLAAAAATGK	Cerebrum	—	100.0	None	—
A6X8Z5	Arhgap31	AQDSTLPGEHPLQLQLK	Cerebellum	—	100.0	None	—
A6X8Z5	Arhgap31	ELPNPLLTYELYEK	Cerebellum	—	100.0	None	—
A6X8Z5	Arhgap31	SQEEPGSTPEIPQK	BrainStem	—	100.0	None	—
A6X8Z5	Arhgap31	SQEEPGSTPEIPQK	Cerebellum	—	100.0	None	—
A6X8Z5	Arhgap31	TSETEPSGDNLLSSK	Cerebellum	—	100.0	None	—
A6X8Z5	Arhgap31	TVTTGGFFIPATK	Cerebellum	—	100.0	None	—
A6X919	Dpy19l1	DSKPHFTTVFQNSVYK	BrainStem	—	100.0	None	—
A6X919	Dpy19l1	DSKPHFTTVFQNSVYK	Cerebrum	—	100.0	None	—
A6X919	Dpy19l1	IFGIADDAHIGNLLTSK	BrainStem	—	100.0	None	—
A6X919	Dpy19l1	IFGIADDAHIGNLLTSK	Cerebrum	—	100.0	None	—
A6X919	Dpy19l1	IFGIADDAHIGNLLTSK	MockWholeBrain	—	100.0	None	—
A6X919	Dpy19l1	LTEYPLVINTLK	Cerebrum	—	100.0	None	—
A6X935	Itih4	LQDQGPDVLLAK	Cerebellum	—	100.0	None	—
A6X935	Itih4	QSLVQATEENLNK	Cerebellum	—	100.0	None	—
A6X935	Itih4	QSLVQATEENLNK	MockWholeBrain	—	100.0	None	—
A6ZI44	Aldoa	GILAADESTGSIAK	Cerebellum	—	100.0	None	—
A6ZI44	Aldoa	TVPPAVTGVTFLSGGQSEEEASINLNAINK	Cerebellum	—	100.0	None	—
A6ZI46	Aldoart1	ALQASALK	Cerebellum	—	100.0	None	—
A6ZI47	Aldoart2	SYPYPALTPEQK	Cerebrum	—	100.0	None	—
A7ISP9	Eml4	DVIVNQEGEYIK	Cerebrum	—	100.0	None	—
A7ISP9	Eml4	LAISEDHVASVK	Cerebrum	—	100.0	None	—
A7ISP9	Eml4	LPVPQNEVITDASVTK	Cerebrum	—	100.0	None	—
A7ISP9	Eml4	YSAHSSHVTNVSFTHNDSHLISTGGK	Cerebrum	—	100.0	None	—
A7YQ68	Prickle2	SLLGRPFLPK	Cerebrum	—	100.0	None	—
A7YQ68	Prickle2	SLLGRPFLPK	MockWholeBrain	—	100.0	None	—
A7YQ68	Prickle2	VPYVNSAGEK	Cerebrum	—	100.0	None	—
A7YQ68	Prickle2	YVTSDELLHK	MockWholeBrain	—	100.0	None	—
A8C756	Thada	ELPLSAEFLK	BrainStem	—	100.0	None	—
A8C756	Thada	ELPLSAEFLK	Cerebellum	—	100.0	None	—
A8C756	Thada	ELPLSAEFLK	Cerebrum	—	100.0	None	—
A8DUK4	Hbb-bs	AAVSGLWGK	Cerebellum	—	100.0	None	—
A8DUK4	Hbb-bs	DFTPAAQAAFQK	BrainStem	—	100.0	None	—
A8DUK4	Hbb-bs	VHLTDAEK	BrainStem	—	100.0	None	—
A8DUK4	Hbb-bs	VITAFNDGLNHLDSLK	BrainStem	—	100.0	None	—
A8DUK4	Hbb-bs	VITAFNDGLNHLDSLK	Cerebellum	—	100.0	None	—
A8DUK4	Hbb-bs	VVAGVAAALAHK	BrainStem	—	100.0	None	—
A8DUL0	Hbbt1	VITAFNDDLNHLDSLK	BrainStem	—	100.0	None	—
A8DUP5	Hbbt1	VHLTDAEK	Cerebrum	—	100.0	None	—
A8DUP5	Hbbt1	VITAFNDGLNHLDSLK	Cerebrum	—	100.0	None	—
A8DUQ1	Hbbt1	AAVSGLWGK	Cerebellum	—	100.0	None	—
A8DUQ1	Hbbt1	AAVSGLWGK	Cerebrum	—	100.0	None	—
A8DUQ1	Hbbt1	DFTPAAQAAFQK	BrainStem	—	100.0	None	—
A8DUQ1	Hbbt1	VHLTDAEK	BrainStem	—	100.0	None	—
A8DUQ1	Hbbt1	VHLTDAEK	Cerebrum	—	100.0	None	—
A8DUQ1	Hbbt1	VITAFNDGLNHLDSLK	BrainStem	—	100.0	None	—

SysQuan Mouse Database

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