SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q7TSV4	Pgm2	EGFHFEETLTGFK	liver	—	100.0	MRM	—
Q7TSV4	Pgm2	EGFHFEETLTGFK	MockWholeBrain	—	100.0	MRM	—
Q7TSV4	Pgm2	EGFHFEETLTGFK	Pancreas	—	100.0	MRM	—
Q7TSV4	Pgm2	EGFHFEETLTGFK	Spleen	—	100.0	MRM	—
Q7TT37	Elp1	IVTVVPQDTK	BrainStem	—	100.0	MRM	—
Q7TT37	Elp1	IVTVVPQDTK	Cerebellum	—	100.0	MRM	—
Q7TT37	Elp1	IVTVVPQDTK	Cerebrum	—	100.0	MRM	—
Q7TT37	Elp1	IVTVVPQDTK	Heart	—	100.0	MRM	—
Q7TT37	Elp1	IVTVVPQDTK	kidney	—	100.0	MRM	—
Q7TT37	Elp1	IVTVVPQDTK	liver	—	100.0	MRM	—
Q7TT37	Elp1	IVTVVPQDTK	lung	—	100.0	MRM	—
Q80SW1	Ahcyl1	SQVDHVIWPDGK	BrainStem	—	100.0	MRM	—
Q80SW1	Ahcyl1	SQVDHVIWPDGK	Heart	—	100.0	MRM	—
Q80T06	Eef1d	ATNFLAHEK	Cerebellum	—	100.0	MRM	—
Q80T06	Eef1d	ATNFLAHEK	liver	—	100.0	MRM	—
Q80T06	Eef1d	ATNFLAHEK	lung	—	100.0	MRM	—
Q80T06	Eef1d	VGTDLLEEEITK	Heart	—	100.0	MRM	—
Q80T06	Eef1d	VGTDLLEEEITK	lung	—	100.0	MRM	—
Q80TF3	Pcdh19	TFATFGK	Cerebrum	—	100.0	MRM	—
Q80TH2	Erbin	NGIQEFPENIK	Cerebellum	—	100.0	MRM	—
Q80U63	Mfn2	IFFVSAK	BrainStem	—	100.0	MRM	—
Q80U63	Mfn2	IFFVSAK	Cerebellum	—	100.0	MRM	—
Q80U63	Mfn2	IFFVSAK	Cerebrum	—	100.0	MRM	—
Q80U63	Mfn2	IFFVSAK	kidney	—	100.0	MRM	—
Q80U63	Mfn2	IFFVSAK	liver	—	100.0	MRM	—
Q80U78	Pum1	YISAAPGAEAK	liver	—	100.0	MRM	—
Q80U78	Pum1	YISAAPGAEAK	MockWholeBrain	—	100.0	MRM	—
Q80U93	Nup214	IFDSPEELPK	BrainStem	—	100.0	MRM	—
Q80U93	Nup214	IFDSPEELPK	Cerebellum	—	100.0	MRM	—
Q80U93	Nup214	IFDSPEELPK	kidney	—	100.0	MRM	—
Q80U93	Nup214	IFDSPEELPK	liver	—	100.0	MRM	—
Q80U93	Nup214	IFDSPEELPK	lung	—	100.0	MRM	—
Q80U93	Nup214	IFDSPEELPK	MockWholeBrain	—	100.0	MRM	—
Q80U95	Ube3c	VVEGFTDEEK	Cerebellum	—	100.0	MRM	—
Q80U95	Ube3c	VVEGFTDEEK	Heart	—	100.0	MRM	—
Q80U95	Ube3c	VVEGFTDEEK	liver	—	100.0	MRM	—
Q80U95	Ube3c	VVEGFTDEEK	lung	—	100.0	MRM	—
Q80UE5	Epb41l2	GLSPAQADSQFLENAK	kidney	—	100.0	MRM	—
Q80UJ7	Rab3gap1	VEEVLNDWK	Heart	—	100.0	MRM	—
Q80UJ7	Rab3gap1	VEEVLNDWK	liver	—	100.0	MRM	—
Q80UJ7	Rab3gap1	VEEVLNDWK	lung	—	100.0	MRM	—
Q80UM7	Mogs	YLGLPGSLK	Cerebellum	—	100.0	MRM	—
Q80UM7	Mogs	YLGLPGSLK	kidney	—	100.0	MRM	—
Q80UM7	Mogs	YLGLPGSLK	liver	—	100.0	MRM	—
Q80UM7	Mogs	YLGLPGSLK	lung	—	100.0	MRM	—
Q80UP3	Dgkz	TLLHHAVSTGSK	lung	—	100.0	MRM	—
Q80UW7	Iqgap1	FLSAIVSSVDK	kidney	—	100.0	MRM	—
Q80UW7	Iqgap1	FLSAIVSSVDK	lung	—	100.0	MRM	—
Q80WJ7	Mtdh	GDSHLNVQVSNFK	BrainStem	—	100.0	MRM	—
Q80WJ7	Mtdh	GDSHLNVQVSNFK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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