SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	TailSkin	—	100.0	MRM+PRM	—
P09055	Itgb1	DNTNEIYSGK	BoneMarrow	—	100.0	MRM+PRM	—
P09055	Itgb1	DNTNEIYSGK	BrainStem	—	100.0	MRM+PRM	—
P09055	Itgb1	DNTNEIYSGK	Cerebellum	—	100.0	MRM+PRM	—
P09055	Itgb1	DNTNEIYSGK	kidney	—	100.0	MRM+PRM	—
P09055	Itgb1	DNTNEIYSGK	liver	—	100.0	MRM+PRM	—
P09055	Itgb1	DNTNEIYSGK	MockWholeBrain	—	100.0	MRM+PRM	—
P09055	Itgb1	DNTNEIYSGK	SmallIntestines	—	100.0	MRM+PRM	—
P09055	Itgb1	DNTNEIYSGK	Spleen	—	100.0	MRM+PRM	—
P10639	Txn	VGEFSGANK	BoneMarrow	—	100.0	MRM+PRM	—
P10639	Txn	VGEFSGANK	Cerebellum	—	100.0	MRM+PRM	—
P10639	Txn	VGEFSGANK	kidney	—	100.0	MRM+PRM	—
P10639	Txn	VGEFSGANK	Pancreas	—	100.0	MRM+PRM	—
P10639	Txn	VGEFSGANK	plasma	—	100.0	MRM+PRM	—
P11087	Col1a1	DLEVDTTLK	plasma	—	100.0	MRM+PRM	—
P11152	Lpl	GLGDVDQLVK	liver	—	100.0	MRM+PRM	—
P11152	Lpl	GLGDVDQLVK	plasma	—	100.0	MRM+PRM	—
P11276	Fn1	ITYGETGGNSPVQEFTVPGSK	Cerebellum	—	100.0	MRM+PRM	—
P11276	Fn1	ITYGETGGNSPVQEFTVPGSK	kidney	—	100.0	MRM+PRM	—
P11276	Fn1	SYTITGLQPGTDYK	Cerebellum	—	100.0	MRM+PRM	—
P11276	Fn1	VGDTYERPK	kidney	—	100.0	MRM+PRM	—
P11438	Lamp1	ALQATVGNSYK	BrainStem	—	100.0	MRM+PRM	—
P11438	Lamp1	ALQATVGNSYK	Cerebellum	—	100.0	MRM+PRM	—
P11438	Lamp1	ALQATVGNSYK	Cerebrum	—	100.0	MRM+PRM	—
P11438	Lamp1	ALQATVGNSYK	Muscle	—	100.0	MRM+PRM	—
P11438	Lamp1	ALQATVGNSYK	plasma	—	100.0	MRM+PRM	—
P12023	App	YLETPGDENEHAHFQK	Cerebellum	—	100.0	MRM+PRM	—
P12023	App	YLETPGDENEHAHFQK	kidney	—	100.0	MRM+PRM	—
P13020	Gsn	QTQVSVLPEGGETPLFK	liver	—	100.0	MRM+PRM	—
P13020	Gsn	QTQVSVLPEGGETPLFK	plasma	—	100.0	MRM+PRM	—
P13707	Gpd1	GVDEGPNGLK	BrainStem	—	100.0	MRM+PRM	—
P13707	Gpd1	GVDEGPNGLK	Cerebellum	—	100.0	MRM+PRM	—
P13707	Gpd1	GVDEGPNGLK	Cerebrum	—	100.0	MRM+PRM	—
P13707	Gpd1	GVDEGPNGLK	kidney	—	100.0	MRM+PRM	—
P13707	Gpd1	GVDEGPNGLK	MockWholeBrain	—	100.0	MRM+PRM	—
P14901	Hmox1	YLGDLSGGQVLK	BoneMarrow	—	100.0	MRM+PRM	—
P14901	Hmox1	YLGDLSGGQVLK	BrainStem	—	100.0	MRM+PRM	—
P14901	Hmox1	YLGDLSGGQVLK	liver	—	100.0	MRM+PRM	—
P15116	Cdh2	LNGDFAQLNLK	BrainStem	—	100.0	MRM+PRM	—
P15116	Cdh2	LNGDFAQLNLK	liver	—	100.0	MRM+PRM	—
P15920	Atp6v0a2	ADIPLPEGEASPPAPPLK	BrainStem	—	100.0	MRM+PRM	—
P15920	Atp6v0a2	ADIPLPEGEASPPAPPLK	Cerebellum	—	100.0	MRM+PRM	—
P15920	Atp6v0a2	ADIPLPEGEASPPAPPLK	Cerebrum	—	100.0	MRM+PRM	—
P15920	Atp6v0a2	ADIPLPEGEASPPAPPLK	liver	—	100.0	MRM+PRM	—
P15920	Atp6v0a2	ADIPLPEGEASPPAPPLK	MockWholeBrain	—	100.0	MRM+PRM	—
P15920	Atp6v0a2	FVPFSFSLLSSK	BrainStem	—	100.0	MRM+PRM	—
P15920	Atp6v0a2	FVPFSFSLLSSK	Cerebellum	—	100.0	MRM+PRM	—
P15920	Atp6v0a2	FVPFSFSLLSSK	Cerebrum	—	100.0	MRM+PRM	—
P16045	Lgals1	SFVLNLGK	BrainStem	—	100.0	MRM+PRM	—
P16045	Lgals1	SFVLNLGK	Cerebellum	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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