SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q60668	Hnrnpd	YHNVGLSK	Cerebrum	—	100.0	MRM	—
Q60668	Hnrnpd	YHNVGLSK	Heart	—	100.0	MRM	—
Q60668	Hnrnpd	YHNVGLSK	liver	—	100.0	MRM	—
Q60668	Hnrnpd	YHNVGLSK	lung	—	100.0	MRM	—
Q60668	Hnrnpd	YHNVGLSK	MockWholeBrain	—	100.0	MRM	—
Q60675	Lama2	NTWWQSPSIK	Cerebellum	—	100.0	MRM	—
Q60715	P4ha1	DPEGFVGHPVNAFK	BrainStem	—	100.0	MRM	—
Q60715	P4ha1	DPEGFVGHPVNAFK	Heart	—	100.0	MRM	—
Q60715	P4ha1	DPEGFVGHPVNAFK	kidney	—	100.0	MRM	—
Q60770	Stxbp3	LAQLVEK	BrainStem	—	100.0	MRM	—
Q60770	Stxbp3	LAQLVEK	lung	—	100.0	MRM	—
Q60864	Stip1	LAYINPDLALEEK	BoneMarrow	—	100.0	MRM	—
Q60864	Stip1	LAYINPDLALEEK	Cerebellum	—	100.0	MRM	—
Q60864	Stip1	LAYINPDLALEEK	Cerebrum	—	100.0	MRM	—
Q60864	Stip1	LAYINPDLALEEK	liver	—	100.0	MRM	—
Q60864	Stip1	LAYINPDLALEEK	lung	—	100.0	MRM	—
Q60864	Stip1	LAYINPDLALEEK	Muscle	—	100.0	MRM	—
Q60864	Stip1	LAYINPDLALEEK	plasma	—	100.0	MRM	—
Q60864	Stip1	LAYINPDLALEEK	TailSkin	—	100.0	MRM	—
Q60930	Vdac2	YQLDPTASISAK	Cerebellum	—	100.0	MRM	—
Q60930	Vdac2	YQLDPTASISAK	Cerebrum	—	100.0	MRM	—
Q60930	Vdac2	YQLDPTASISAK	TailSkin	—	100.0	MRM	—
Q60931	Vdac3	VNNASLIGLGYTQTLRPGVK	kidney	—	100.0	MRM	—
Q60931	Vdac3	VNNASLIGLGYTQTLRPGVK	liver	—	100.0	MRM	—
Q60931	Vdac3	VNNASLIGLGYTQTLRPGVK	lung	—	100.0	MRM	—
Q60931	Vdac3	VNNASLIGLGYTQTLRPGVK	Pancreas	—	100.0	MRM	—
Q60950	Ybx1	GAEAANVTGPGGVPVQGSK	liver	—	100.0	MRM	—
Q60967	Papss1	DIVPVDASYEVK	Cerebellum	—	100.0	MRM	—
Q60967	Papss1	DIVPVDASYEVK	Cerebrum	—	100.0	MRM	—
Q60967	Papss1	DIVPVDASYEVK	Heart	—	100.0	MRM	—
Q60967	Papss1	DIVPVDASYEVK	liver	—	100.0	MRM	—
Q60967	Papss1	DIVPVDASYEVK	MockWholeBrain	—	100.0	MRM	—
Q60967	Papss1	DIVPVDASYEVK	SmallIntestines	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	BrainStem	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	Cerebellum	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	Cerebrum	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	Heart	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	kidney	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	liver	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	lung	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	MockWholeBrain	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	SmallIntestines	—	100.0	MRM	—
Q60972	Rbbp4	TPSSDVLVFDYTK	BoneMarrow	—	100.0	MRM	—
Q60973	Rbbp7	TPSSDVLVFDYTK	TailSkin	—	100.0	MRM	—
Q61024	Asns	EAFSDGITSVK	BoneMarrow	—	100.0	MRM	—
Q61024	Asns	EAFSDGITSVK	BrainStem	—	100.0	MRM	—
Q61024	Asns	EAFSDGITSVK	Cerebellum	—	100.0	MRM	—
Q61024	Asns	EAFSDGITSVK	kidney	—	100.0	MRM	—
Q61024	Asns	EAFSDGITSVK	liver	—	100.0	MRM	—
Q61024	Asns	EAFSDGITSVK	Spleen	—	100.0	MRM	—

SysQuan Mouse Database

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