SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q3V117	Acly	FGGALDAAAK	liver	—	100.0	MRM	—
Q3V117	Acly	LTLLNPK	BrainStem	—	100.0	MRM	—
Q3V117	Acly	LTLLNPK	Cerebrum	—	100.0	MRM	—
Q3V117	Acly	LTLLNPK	kidney	—	100.0	MRM	—
Q3V117	Acly	LTLLNPK	liver	—	100.0	MRM	—
Q3V117	Acly	LTLLNPK	lung	—	100.0	MRM	—
Q3V1L4	Nt5c2	DAVDWVHYK	BrainStem	—	100.0	MRM	—
Q3V1L4	Nt5c2	DAVDWVHYK	Cerebellum	—	100.0	MRM	—
Q3V1L4	Nt5c2	DAVDWVHYK	liver	—	100.0	MRM	—
Q3V1L4	Nt5c2	DAVDWVHYK	MockWholeBrain	—	100.0	MRM	—
Q3V1L4	Nt5c2	GLVFDTLYGNLLK	BoneMarrow	—	100.0	MRM	—
Q3V1L4	Nt5c2	GLVFDTLYGNLLK	BrainStem	—	100.0	MRM	—
Q3V1L4	Nt5c2	GLVFDTLYGNLLK	Cerebellum	—	100.0	MRM	—
Q3V1L4	Nt5c2	GLVFDTLYGNLLK	Cerebrum	—	100.0	MRM	—
Q3V1L4	Nt5c2	GLVFDTLYGNLLK	kidney	—	100.0	MRM	—
Q3V1L4	Nt5c2	GLVFDTLYGNLLK	liver	—	100.0	MRM	—
Q3V1L4	Nt5c2	GLVFDTLYGNLLK	lung	—	100.0	MRM	—
Q3V1L4	Nt5c2	GLVFDTLYGNLLK	MockWholeBrain	—	100.0	MRM	—
Q3V1L4	Nt5c2	GLVFDTLYGNLLK	Spleen	—	100.0	MRM	—
Q3V1Z5	Rps4l	LSNIFVIGK	Spermatozoa	—	100.0	MRM	—
Q3V2X3	Il1rap	TQILSIK	Cerebrum	—	100.0	MRM	—
Q3V3M3	Frg1	EVDEGPSPPEQFTAVK	Cerebrum	—	100.0	MRM	—
Q497Z6	Hmgb1	GEHPGLSIGDVAK	Cerebellum	—	100.0	MRM	—
Q497Z6	Hmgb1	GEHPGLSIGDVAK	Cerebrum	—	100.0	MRM	—
Q4KWH5	Plch1	ILIDSIYK	BrainStem	—	100.0	MRM	—
Q4KWH5	Plch1	ILIDSIYK	Cerebellum	—	100.0	MRM	—
Q4KWH5	Plch1	ILIDSIYK	Cerebrum	—	100.0	MRM	—
Q4KWH5	Plch1	ILIDSIYK	Heart	—	100.0	MRM	—
Q4KWH5	Plch1	ILIDSIYK	MockWholeBrain	—	100.0	MRM	—
Q4KWH5	Plch1	ILIDSIYK	Pancreas	—	100.0	MRM	—
Q4KWH5	Plch1	ILIDSIYK	Spermatozoa	—	100.0	MRM	—
Q4PZA2	Ece1	AFEESLSTLK	kidney	—	100.0	MRM	—
Q4PZA2	Ece1	AFEESLSTLK	liver	—	100.0	MRM	—
Q4VA53	Pds5b	SALLPVLHHK	BoneMarrow	—	100.0	MRM	—
Q4VA53	Pds5b	SALLPVLHHK	BrainStem	—	100.0	MRM	—
Q4VA53	Pds5b	SALLPVLHHK	Cerebellum	—	100.0	MRM	—
Q4VA53	Pds5b	SALLPVLHHK	Cerebrum	—	100.0	MRM	—
Q4VA53	Pds5b	SALLPVLHHK	kidney	—	100.0	MRM	—
Q4VA53	Pds5b	SALLPVLHHK	lung	—	100.0	MRM	—
Q4VA53	Pds5b	SALLPVLHHK	MockWholeBrain	—	100.0	MRM	—
Q4VAA7	Snx33	FTVISVPHLPEK	BrainStem	—	100.0	MRM	—
Q4VAA7	Snx33	FTVISVPHLPEK	Cerebellum	—	100.0	MRM	—
Q4VAA7	Snx33	FTVISVPHLPEK	Cerebrum	—	100.0	MRM	—
Q4VAA7	Snx33	FTVISVPHLPEK	kidney	—	100.0	MRM	—
Q4VAA7	Snx33	FTVISVPHLPEK	liver	—	100.0	MRM	—
Q4VAA7	Snx33	FTVISVPHLPEK	lung	—	100.0	MRM	—
Q4VAA7	Snx33	FTVISVPHLPEK	MockWholeBrain	—	100.0	MRM	—
Q501J6	Ddx17	GLDVEDVK	BrainStem	—	100.0	MRM	—
Q501J6	Ddx17	GLDVEDVK	Cerebrum	—	100.0	MRM	—
Q501J6	Ddx17	GLDVEDVK	Heart	—	100.0	MRM	—

SysQuan Mouse Database

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