SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9Z1P6	Ndufa7	LPVGPSHK	Muscle	—	100.0	MRM+PRM	—
Q9Z1P6	Ndufa7	LPVGPSHK	SmallIntestines	—	100.0	MRM+PRM	—
Q9Z1Q2	Abhd16a	GNDLLLK	BrainStem	—	100.0	MRM+PRM	—
Q9Z1Q2	Abhd16a	GNDLLLK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z1Q2	Abhd16a	GNDLLLK	Heart	—	100.0	MRM+PRM	—
Q9Z1Q2	Abhd16a	GNDLLLK	kidney	—	100.0	MRM+PRM	—
Q9Z1Q2	Abhd16a	GNDLLLK	lung	—	100.0	MRM+PRM	—
Q9Z1Q2	Abhd16a	GNDLLLK	Muscle	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	AdrenalGland	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	Bladder	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	BoneMarrow	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	BrainStem	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	Gallbladder	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	LymphNodes	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	SmallIntestines	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	Spleen	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	TailSkin	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	Thymus	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	AEEQPQVELFVK	Thyroid	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	AdrenalGland	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	Bladder	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	BrainStem	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	lung	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	LymphNodes	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	Muscle	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	plasma	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	Spleen	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	TailSkin	—	100.0	MRM+PRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	Thyroid	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	AdrenalGland	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	BoneMarrow	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	Heart	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	kidney	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	SmallIntestines	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	Thymus	—	100.0	MRM+PRM	—
Q9Z1Q9	Vars1	DPGVITYDLPTPPGEK	Thyroid	—	100.0	MRM+PRM	—
Q9Z1T2	Thbs4	AVAEPGIQLK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z1T2	Thbs4	AVAEPGIQLK	Muscle	—	100.0	MRM+PRM	—
Q9Z1T2	Thbs4	AVAEPGIQLK	plasma	—	100.0	MRM+PRM	—
Q9Z1T6	Pikfyve	LQDLFQQEK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z1T6	Pikfyve	LQDLFQQEK	Cerebrum	—	100.0	MRM+PRM	—
Q9Z1T6	Pikfyve	LQDLFQQEK	kidney	—	100.0	MRM+PRM	—
Q9Z1Z2	Strap	TVDFTQDSNYLLTGGQDK	Cerebellum	—	100.0	MRM+PRM	—
Q9Z1Z2	Strap	TVDFTQDSNYLLTGGQDK	kidney	—	100.0	MRM+PRM	—
Q9Z1Z2	Strap	TVDFTQDSNYLLTGGQDK	LymphNodes	—	100.0	MRM+PRM	—
Q9Z1Z2	Strap	TVDFTQDSNYLLTGGQDK	TailSkin	—	100.0	MRM+PRM	—
Q9Z1Z2	Strap	TVDFTQDSNYLLTGGQDK	Thymus	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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