SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q6ZQ38	Cand1	AADIDQEVK	BrainStem	—	100.0	MRM	—
Q6ZQ38	Cand1	AADIDQEVK	Cerebellum	—	100.0	MRM	—
Q6ZQ38	Cand1	ADVFHAYLSLLK	BrainStem	—	100.0	MRM	—
Q6ZQ38	Cand1	ADVFHAYLSLLK	Cerebellum	—	100.0	MRM	—
Q6ZQ38	Cand1	NGEVQNLAVK	BrainStem	—	100.0	MRM	—
Q6ZQ38	Cand1	NGEVQNLAVK	Cerebrum	—	100.0	MRM	—
Q6ZQ38	Cand1	NGEVQNLAVK	MockWholeBrain	—	100.0	MRM	—
Q6ZWN5	Rps9	IGVLDEGK	Cerebrum	—	100.0	MRM	—
Q6ZWQ7	Spcs3	YFFFDDGNGLK	BrainStem	—	100.0	MRM	—
Q6ZWQ7	Spcs3	YFFFDDGNGLK	Cerebrum	—	100.0	MRM	—
Q6ZWQ7	Spcs3	YFFFDDGNGLK	MockWholeBrain	—	100.0	MRM	—
Q6ZWV7	Rpl35	VLTVINQTQK	BrainStem	—	100.0	MRM	—
Q6ZWV7	Rpl35	VLTVINQTQK	Cerebellum	—	100.0	MRM	—
Q6ZWV7	Rpl35	VLTVINQTQK	Cerebrum	—	100.0	MRM	—
Q71RI9	Kyat3	TFSVTGWK	BrainStem	—	100.0	MRM	—
Q71RI9	Kyat3	TFSVTGWK	Cerebrum	—	100.0	MRM	—
Q71RI9	Kyat3	TFSVTGWK	MockWholeBrain	—	100.0	MRM	—
Q76KF0	Sema6d	TPDSVWTAVPEDK	Cerebellum	—	100.0	MRM	—
Q76MZ3	Ppp2r1a	ELVSDANQHVK	BrainStem	—	100.0	MRM	—
Q76MZ3	Ppp2r1a	ELVSDANQHVK	Cerebellum	—	100.0	MRM	—
Q76MZ3	Ppp2r1a	ELVSDANQHVK	Cerebrum	—	100.0	MRM	—
Q76MZ3	Ppp2r1a	IGPILDNSTLQSEVKPILEK	BrainStem	—	100.0	MRM	—
Q76MZ3	Ppp2r1a	IGPILDNSTLQSEVKPILEK	Cerebellum	—	100.0	MRM	—
Q76MZ3	Ppp2r1a	IGPILDNSTLQSEVKPILEK	Cerebrum	—	100.0	MRM	—
Q78PY7	Snd1	NLPGLVQEGEPFSEEATLFTK	Cerebellum	—	100.0	MRM	—
Q78PY7	Snd1	NLPGLVQEGEPFSEEATLFTK	Cerebrum	—	100.0	MRM	—
Q78PY7	Snd1	NLPGLVQEGEPFSEEATLFTK	MockWholeBrain	—	100.0	MRM	—
Q7TMF3	Ndufa12	FIWTNHK	BrainStem	—	100.0	MRM	—
Q7TMF3	Ndufa12	FIWTNHK	Cerebellum	—	100.0	MRM	—
Q7TMF3	Ndufa12	FIWTNHK	Cerebrum	—	100.0	MRM	—
Q7TMK9	Syncrip	DLFEDELVPLFEK	Cerebellum	—	100.0	MRM	—
Q7TMK9	Syncrip	EQILEEFSK	Cerebellum	—	100.0	MRM	—
Q7TMK9	Syncrip	EQILEEFSK	Cerebrum	—	100.0	MRM	—
Q7TMK9	Syncrip	VTEGLTDVILYHQPDDK	Cerebellum	—	100.0	MRM	—
Q7TMY8	Huwe1	FLQFVTGTSK	BrainStem	—	100.0	MRM	—
Q7TMY8	Huwe1	FLQFVTGTSK	Cerebrum	—	100.0	MRM	—
Q7TNC9	Inpp5a	AADTNEVVK	BrainStem	—	100.0	MRM	—
Q7TNC9	Inpp5a	AADTNEVVK	Cerebellum	—	100.0	MRM	—
Q7TNC9	Inpp5a	AADTNEVVK	MockWholeBrain	—	100.0	MRM	—
Q7TNC9	Inpp5a	NIYQFDFK	Cerebrum	—	100.0	MRM	—
Q7TNG5	Eml2	VVLWGSDYSK	Cerebrum	—	100.0	MRM	—
Q7TPR4	Actn1	LLETIDQLYLEYAK	BrainStem	—	100.0	MRM	—
Q7TPR4	Actn1	LLETIDQLYLEYAK	Cerebellum	—	100.0	MRM	—
Q7TQI3	Otub1	EYAEDDNIYQQK	BrainStem	—	100.0	MRM	—
Q7TQI3	Otub1	EYAEDDNIYQQK	Cerebellum	—	100.0	MRM	—
Q7TQI3	Otub1	EYAEDDNIYQQK	Cerebrum	—	100.0	MRM	—
Q7TQI3	Otub1	EYAEDDNIYQQK	MockWholeBrain	—	100.0	MRM	—
Q7TSV4	Pgm2	EGFHFEETLTGFK	Cerebrum	—	100.0	MRM	—
Q7TSV4	Pgm2	EGFHFEETLTGFK	MockWholeBrain	—	100.0	MRM	—
Q80T06	Eef1d	ATNFLAHEK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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