SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q3TJJ5	Prkci	LDNVLLDSEGHIK	Cerebrum	—	100.0	MRM	—
Q3TJJ5	Prkci	LDNVLLDSEGHIK	lung	—	100.0	MRM	—
Q3TJJ5	Prkci	LDNVLLDSEGHIK	MockWholeBrain	—	100.0	MRM	—
Q3TJL8	Pdia6	NSYLEVLLK	BoneMarrow	—	100.0	MRM	—
Q3TJL8	Pdia6	NSYLEVLLK	Cerebellum	—	100.0	MRM	—
Q3TJL8	Pdia6	NSYLEVLLK	Heart	—	100.0	MRM	—
Q3TJL8	Pdia6	NSYLEVLLK	kidney	—	100.0	MRM	—
Q3TJL8	Pdia6	NSYLEVLLK	liver	—	100.0	MRM	—
Q3TJL8	Pdia6	NSYLEVLLK	MockWholeBrain	—	100.0	MRM	—
Q3TJL8	Pdia6	NSYLEVLLK	SmallIntestines	—	100.0	MRM	—
Q3TKF8	Hspa5	ETAEAYLGK	BrainStem	—	100.0	MRM	—
Q3TL20	Rps2	GTGIVSAPVPK	kidney	—	100.0	MRM	—
Q3TL20	Rps2	GTGIVSAPVPK	liver	—	100.0	MRM	—
Q3TL44	Nlrx1	NLDALENAQAIK	Cerebellum	—	100.0	MRM	—
Q3TL44	Nlrx1	NLDALENAQAIK	kidney	—	100.0	MRM	—
Q3TL44	Nlrx1	NLDALENAQAIK	liver	—	100.0	MRM	—
Q3TL44	Nlrx1	NLDALENAQAIK	lung	—	100.0	MRM	—
Q3TMH2	Scrn3	NISNQLSITTK	BoneMarrow	—	100.0	MRM	—
Q3TMH2	Scrn3	NISNQLSITTK	BrainStem	—	100.0	MRM	—
Q3TMH2	Scrn3	NISNQLSITTK	Cerebellum	—	100.0	MRM	—
Q3TMH2	Scrn3	NISNQLSITTK	Cerebrum	—	100.0	MRM	—
Q3TMH2	Scrn3	NISNQLSITTK	kidney	—	100.0	MRM	—
Q3TMH2	Scrn3	NISNQLSITTK	liver	—	100.0	MRM	—
Q3TMH2	Scrn3	NISNQLSITTK	MockWholeBrain	—	100.0	MRM	—
Q3TNA1	Xylb	FTGNQIAK	kidney	—	100.0	MRM	—
Q3TNH0	Tmpo	PEFLEDPSVLTK	liver	—	100.0	MRM	—
Q3TNH0	Tmpo	PEFLEDPSVLTK	MockWholeBrain	—	100.0	MRM	—
Q3TPX4	Exoc5	SIGTGGIQDLK	BrainStem	—	100.0	MRM	—
Q3TPX4	Exoc5	SIGTGGIQDLK	Cerebellum	—	100.0	MRM	—
Q3TPX4	Exoc5	SIGTGGIQDLK	Cerebrum	—	100.0	MRM	—
Q3TPX4	Exoc5	SIGTGGIQDLK	kidney	—	100.0	MRM	—
Q3TPX4	Exoc5	SIGTGGIQDLK	liver	—	100.0	MRM	—
Q3TPX4	Exoc5	SIGTGGIQDLK	lung	—	100.0	MRM	—
Q3TQ29	Pum2	YISAAPGAEAK	Cerebellum	—	100.0	MRM	—
Q3TQN1	Tpst2	STDQVIKPVNLEALSK	lung	—	100.0	MRM	—
Q3TR40	Thbs1	AQGYSGLSVK	plasma	—	100.0	MRM	—
Q3TRH3	Hspa8	ITITNDK	liver	—	100.0	MRM	—
Q3TRH3	Hspa8	ITITNDK	plasma	—	100.0	MRM	—
Q3TRH3	Hspa8	LLQDFFNGK	liver	—	100.0	MRM	—
Q3TRH3	Hspa8	LLQDFFNGK	plasma	—	100.0	MRM	—
Q3TTX0	Matr3	GAPPSSNIEDFHGLLPK	Heart	—	100.0	MRM	—
Q3TUN5	Psmc4	VVGSEFVQK	lung	—	100.0	MRM	—
Q3TVF4	Rabggtb	SDAPDTLLLEK	liver	—	100.0	MRM	—
Q3TWF2	Hspa5	ETAEAYLGK	lung	—	100.0	MRM	—
Q3TWF2	Hspa5	IINEPTAAAIAYGLDK	lung	—	100.0	MRM	—
Q3TWF2	Hspa5	SQIFSTASDNQPTVTIK	lung	—	100.0	MRM	—
Q3TWV4	Ap2m1	LNYSDHDVIK	Cerebrum	—	100.0	MRM	—
Q3TWV4	Ap2m1	TFITQQGIK	SmallIntestines	—	100.0	MRM	—
Q3TX36	Parp1	KPPLLNNADSVQAK	BrainStem	—	100.0	MRM	—
Q3TX36	Parp1	KPPLLNNADSVQAK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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