SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q3THK7	Gmps	ELFVQSEIFPLETPAFAIK	BrainStem	—	100.0	MRM	—
Q3THK7	Gmps	ELFVQSEIFPLETPAFAIK	Cerebellum	—	100.0	MRM	—
Q3THK7	Gmps	ELFVQSEIFPLETPAFAIK	Cerebrum	—	100.0	MRM	—
Q3THK7	Gmps	ELFVQSEIFPLETPAFAIK	Heart	—	100.0	MRM	—
Q3THK7	Gmps	ELFVQSEIFPLETPAFAIK	kidney	—	100.0	MRM	—
Q3THK7	Gmps	ELFVQSEIFPLETPAFAIK	liver	—	100.0	MRM	—
Q3THK7	Gmps	ELFVQSEIFPLETPAFAIK	lung	—	100.0	MRM	—
Q3THK7	Gmps	ELFVQSEIFPLETPAFAIK	MockWholeBrain	—	100.0	MRM	—
Q3THK7	Gmps	ELFVQSEIFPLETPAFAIK	Spleen	—	100.0	MRM	—
Q3THK7	Gmps	IIGDTFVK	BrainStem	—	100.0	MRM	—
Q3THK7	Gmps	IIGDTFVK	Cerebellum	—	100.0	MRM	—
Q3THK7	Gmps	IIGDTFVK	Heart	—	100.0	MRM	—
Q3THK7	Gmps	IIGDTFVK	SmallIntestines	—	100.0	MRM	—
Q3THS6	Mat2a	IIVDTYGGWGAHGGGAFSGK	BoneMarrow	—	100.0	MRM	—
Q3THS6	Mat2a	IIVDTYGGWGAHGGGAFSGK	BrainStem	—	100.0	MRM	—
Q3THS6	Mat2a	IIVDTYGGWGAHGGGAFSGK	Cerebellum	—	100.0	MRM	—
Q3THS6	Mat2a	IIVDTYGGWGAHGGGAFSGK	Cerebrum	—	100.0	MRM	—
Q3THS6	Mat2a	IIVDTYGGWGAHGGGAFSGK	Heart	—	100.0	MRM	—
Q3THS6	Mat2a	IIVDTYGGWGAHGGGAFSGK	lung	—	100.0	MRM	—
Q3THS6	Mat2a	IIVDTYGGWGAHGGGAFSGK	MockWholeBrain	—	100.0	MRM	—
Q3THS6	Mat2a	IIVDTYGGWGAHGGGAFSGK	Muscle	—	100.0	MRM	—
Q3THS6	Mat2a	IIVDTYGGWGAHGGGAFSGK	Pancreas	—	100.0	MRM	—
Q3THS6	Mat2a	IIVDTYGGWGAHGGGAFSGK	SmallIntestines	—	100.0	MRM	—
Q3TI62	Cct6a	VLAQNSGFDLQETLVK	BrainStem	—	100.0	MRM	—
Q3TII0	Cct4	GIHPTIISESFQK	Cerebellum	—	100.0	MRM	—
Q3TII3	Eef1a1	QLIVGVNK	liver	—	100.0	MRM	—
Q3TII3	Eef1a1	STTTGHLIYK	liver	—	100.0	MRM	—
Q3TII3	Eef1a1	THINIVVIGHVDSGK	liver	—	100.0	MRM	—
Q3TIR1	Trappc13	FQVLKPLDVK	BrainStem	—	100.0	MRM	—
Q3TIR1	Trappc13	FQVLKPLDVK	Cerebellum	—	100.0	MRM	—
Q3TIR1	Trappc13	FQVLKPLDVK	Cerebrum	—	100.0	MRM	—
Q3TIR1	Trappc13	FQVLKPLDVK	kidney	—	100.0	MRM	—
Q3TIR1	Trappc13	FQVLKPLDVK	liver	—	100.0	MRM	—
Q3TIR1	Trappc13	FQVLKPLDVK	lung	—	100.0	MRM	—
Q3TIV3	Parp1	KPPLLNNADSVQAK	BoneMarrow	—	100.0	MRM	—
Q3TIV3	Parp1	KPPLLNNADSVQAK	Cerebrum	—	100.0	MRM	—
Q3TIV3	Parp1	KPPLLNNADSVQAK	Pancreas	—	100.0	MRM	—
Q3TIX9	Usp39	EYLSEEVQAVHK	BoneMarrow	—	100.0	MRM	—
Q3TIX9	Usp39	EYLSEEVQAVHK	BrainStem	—	100.0	MRM	—
Q3TIX9	Usp39	EYLSEEVQAVHK	Cerebellum	—	100.0	MRM	—
Q3TIX9	Usp39	EYLSEEVQAVHK	Cerebrum	—	100.0	MRM	—
Q3TIX9	Usp39	EYLSEEVQAVHK	Heart	—	100.0	MRM	—
Q3TIX9	Usp39	EYLSEEVQAVHK	kidney	—	100.0	MRM	—
Q3TIX9	Usp39	EYLSEEVQAVHK	liver	—	100.0	MRM	—
Q3TIX9	Usp39	EYLSEEVQAVHK	lung	—	100.0	MRM	—
Q3TIX9	Usp39	EYLSEEVQAVHK	SmallIntestines	—	100.0	MRM	—
Q3TJ95	Cltb	LQELDAASK	liver	—	100.0	MRM	—
Q3TJ95	Cltb	LQELDAASK	TailSkin	—	100.0	MRM	—
Q3TJJ5	Prkci	LDNVLLDSEGHIK	BrainStem	—	100.0	MRM	—
Q3TJJ5	Prkci	LDNVLLDSEGHIK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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