SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P70290	Mpp1	FETVHQIHK	kidney	—	100.0	MRM	—
P70290	Mpp1	FETVHQIHK	liver	—	100.0	MRM	—
P70290	Mpp1	FETVHQIHK	lung	—	100.0	MRM	—
P70296	Pebp1	LYEQLSGK	BoneMarrow	—	100.0	MRM	—
P70296	Pebp1	LYEQLSGK	Cerebrum	—	100.0	MRM	—
P70296	Pebp1	LYEQLSGK	Heart	—	100.0	MRM	—
P70296	Pebp1	LYEQLSGK	kidney	—	100.0	MRM	—
P70296	Pebp1	LYEQLSGK	lung	—	100.0	MRM	—
P70296	Pebp1	LYEQLSGK	Muscle	—	100.0	MRM	—
P70296	Pebp1	LYEQLSGK	plasma	—	100.0	MRM	—
P70296	Pebp1	LYEQLSGK	SmallIntestines	—	100.0	MRM	—
P70296	Pebp1	LYEQLSGK	TailSkin	—	100.0	MRM	—
P70303	Ctps2	ALEHSALAINHK	BrainStem	—	100.0	MRM	—
P70303	Ctps2	ALEHSALAINHK	Cerebellum	—	100.0	MRM	—
P70303	Ctps2	ALEHSALAINHK	kidney	—	100.0	MRM	—
P70303	Ctps2	ALEHSALAINHK	liver	—	100.0	MRM	—
P70303	Ctps2	ALEHSALAINHK	lung	—	100.0	MRM	—
P70303	Ctps2	ALEHSALAINHK	SmallIntestines	—	100.0	MRM	—
P70313	Nos3	ESELVFGAK	lung	—	100.0	MRM	—
P70318	Tial1	FEDVVNQSSPK	Pancreas	—	100.0	MRM	—
P70333	Hnrnph2	PSGEAFVELESEDEVK	Spleen	—	100.0	MRM	—
P70335	Rock1	TQAFEADNLK	BrainStem	—	100.0	MRM	—
P70335	Rock1	TQAFEADNLK	Cerebellum	—	100.0	MRM	—
P70335	Rock1	TQAFEADNLK	Cerebrum	—	100.0	MRM	—
P70335	Rock1	TQAFEADNLK	Heart	—	100.0	MRM	—
P70335	Rock1	TQAFEADNLK	kidney	—	100.0	MRM	—
P70335	Rock1	TQAFEADNLK	liver	—	100.0	MRM	—
P70335	Rock1	TQAFEADNLK	lung	—	100.0	MRM	—
P70336	Rock2	VIQQSLEQEEAEHK	Spleen	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	BoneMarrow	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	BrainStem	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	Cerebellum	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	Cerebrum	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	Heart	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	kidney	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	liver	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	lung	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	MockWholeBrain	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	Muscle	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	Pancreas	—	100.0	MRM	—
P70404	Idh3g	GNIETNHNLPPSHK	SmallIntestines	—	100.0	MRM	—
P70460	Vasp	QVWGLNFGSK	BrainStem	—	100.0	MRM	—
P70460	Vasp	QVWGLNFGSK	Cerebellum	—	100.0	MRM	—
P70460	Vasp	QVWGLNFGSK	Cerebrum	—	100.0	MRM	—
P70460	Vasp	QVWGLNFGSK	kidney	—	100.0	MRM	—
P70670	Naca	IEDLSQQAQLAAAEK	Cerebellum	—	100.0	MRM	—
P70670	Naca	IEDLSQQAQLAAAEK	Cerebrum	—	100.0	MRM	—
P70670	Naca	IEDLSQQAQLAAAEK	liver	—	100.0	MRM	—
P70670	Naca	IEDLSQQAQLAAAEK	lung	—	100.0	MRM	—
P70670	Naca	IEDLSQQAQLAAAEK	MockWholeBrain	—	100.0	MRM	—

SysQuan Mouse Database

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