SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
E9Q414	Apob	QGFFPDSVNK	liver	—	100.0	MRM+PRM	—
E9Q456	Tpm1	SIDDLEDELYAQK	Cerebellum	—	100.0	MRM+PRM	—
E9Q4S7	Ptprj	FSGFEASHGPIK	kidney	—	100.0	MRM+PRM	—
E9Q4S7	Ptprj	FSGFEASHGPIK	liver	—	100.0	MRM+PRM	—
E9QAE4	Nsd1	VGLFALSDIK	Cerebrum	—	100.0	MRM+PRM	—
E9QPU1	Vwf	HIVTFDGQNFK	plasma	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	BoneMarrow	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	BrainStem	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	Cerebellum	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	Cerebrum	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	liver	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	MockWholeBrain	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	Muscle	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	Pancreas	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	plasma	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	SmallIntestines	—	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	Spleen	—	100.0	MRM+PRM	—
F8WGR0	Add1	TSTSAVPNLFVPLNTNPK	Cerebellum	—	100.0	MRM+PRM	—
G3X9S2	Enpp1	IPLSPVHK	Cerebellum	—	100.0	MRM+PRM	—
G3XA48	Idi1	AFSVFLFNTENK	kidney	—	100.0	MRM+PRM	—
G5E8T9	Hagh	LTTVLTTHHHWDHAGGNEK	Cerebrum	—	100.0	MRM+PRM	—
O08529	Capn2	ALEEAGFK	BrainStem	—	100.0	MRM+PRM	—
O08529	Capn2	ALEEAGFK	Cerebellum	—	100.0	MRM+PRM	—
O08529	Capn2	ALEEAGFK	Cerebrum	—	100.0	MRM+PRM	—
O08529	Capn2	ALEEAGFK	liver	—	100.0	MRM+PRM	—
O08529	Capn2	ALEEAGFK	MockWholeBrain	—	100.0	MRM+PRM	—
O08553	Dpysl2	GSPLVVISQGK	TailSkin	—	100.0	MRM+PRM	—
O08788	Dctn1	DQLDETVNVEPLTK	Spleen	—	100.0	MRM+PRM	—
O08807	Prdx4	LVQAFQYTDK	BrainStem	—	100.0	MRM+PRM	—
O08807	Prdx4	LVQAFQYTDK	Cerebellum	—	100.0	MRM+PRM	—
O08807	Prdx4	LVQAFQYTDK	Cerebrum	—	100.0	MRM+PRM	—
O08807	Prdx4	LVQAFQYTDK	liver	—	100.0	MRM+PRM	—
O08807	Prdx4	LVQAFQYTDK	MockWholeBrain	—	100.0	MRM+PRM	—
O08912	Galnt1	GNQLWEYDPVK	Cerebrum	—	100.0	MRM+PRM	—
O09044	Snap23	ILGLAIESQDAGIK	BoneMarrow	—	100.0	MRM+PRM	—
O09044	Snap23	ILGLAIESQDAGIK	BrainStem	—	100.0	MRM+PRM	—
O09044	Snap23	ILGLAIESQDAGIK	Cerebrum	—	100.0	MRM+PRM	—
O09044	Snap23	ILGLAIESQDAGIK	liver	—	100.0	MRM+PRM	—
O09131	Gsto1	HEVININLK	BoneMarrow	—	100.0	MRM+PRM	—
O09131	Gsto1	HEVININLK	kidney	—	100.0	MRM+PRM	—
O09131	Gsto1	HEVININLK	Pancreas	—	100.0	MRM+PRM	—
O09131	Gsto1	HEVININLK	TailSkin	—	100.0	MRM+PRM	—
O09172	Gclm	IVAIGTSDLDK	Cerebrum	—	100.0	MRM+PRM	—
O09172	Gclm	IVAIGTSDLDK	liver	—	100.0	MRM+PRM	—
O09172	Gclm	QFDIQLLTHNDPK	Cerebrum	—	100.0	MRM+PRM	—
O09172	Gclm	QFDIQLLTHNDPK	liver	—	100.0	MRM+PRM	—
O09172	Gclm	QFDIQLLTHNDPK	Muscle	—	100.0	MRM+PRM	—
O09172	Gclm	QFDIQLLTHNDPK	plasma	—	100.0	MRM+PRM	—
O09172	Gclm	QFDIQLLTHNDPK	Spermatozoa	—	100.0	MRM+PRM	—
O35350	Capn1	APSDLYQIILK	BrainStem	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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