SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
A0A411ACZ2	Cacna2d2	RPWYIQGASSPK	Cerebellum	—	100.0	None	—
A0A411ACZ2	Cacna2d2	TLRPAVVGVK	Cerebellum	—	100.0	None	—
A0A411P8U6	Mbp	FSWGAEGQK	MockWholeBrain	—	100.0	None	—
A0A411P8U6	Mbp	FSWGAEGQKPGFGYGGR	BrainStem	—	100.0	None	—
A0A411P8U6	Mbp	FSWGAEGQKPGFGYGGR	Cerebrum	—	100.0	None	—
A0A411P8U6	Mbp	FSWGAEGQKPGFGYGGR	MockWholeBrain	—	100.0	None	—
A0A411P8U6	Mbp	GAYDAQGTLSK	BrainStem	—	100.0	None	—
A0A411P8U6	Mbp	GAYDAQGTLSK	Cerebellum	—	100.0	None	—
A0A411P8U6	Mbp	GAYDAQGTLSK	Cerebrum	—	100.0	None	—
A0A411P8U6	Mbp	TPPPSQGK	BrainStem	—	100.0	None	—
A0A411P8U6	Mbp	TPPPSQGK	Cerebellum	—	100.0	None	—
A0A411P8U6	Mbp	TPPPSQGK	MockWholeBrain	—	100.0	None	—
A0A411P8U6	Mbp	TQDENPVVHFFK	Cerebellum	—	100.0	None	—
A0A411P8U6	Mbp	TQDENPVVHFFK	Cerebrum	—	100.0	None	—
A0A411P8U6	Mbp	TTHYGSLPQK	Cerebellum	—	100.0	None	—
A0A411P8U6	Mbp	TTHYGSLPQK	Cerebrum	—	100.0	None	—
A0A494B953	Nedd4l	DIFGASDPYVK	BrainStem	—	100.0	None	—
A0A494B953	Nedd4l	ELALVQTK	Cerebellum	—	100.0	None	—
A0A494B953	Nedd4l	ELALVQTK	MockWholeBrain	—	100.0	None	—
A0A494B953	Nedd4l	EWFFLISK	Cerebellum	—	100.0	None	—
A0A494B953	Nedd4l	EWFFLISK	Cerebrum	—	100.0	None	—
A0A494B953	Nedd4l	EWFFLISK	MockWholeBrain	—	100.0	None	—
A0A494B953	Nedd4l	LLDGFFIRPFYK	Cerebellum	—	100.0	None	—
A0A494B953	Nedd4l	LLDGFFIRPFYK	Cerebrum	—	100.0	None	—
A0A494B953	Nedd4l	LLDGFFIRPFYK	MockWholeBrain	—	100.0	None	—
A0A494B953	Nedd4l	LWIEFESEK	BrainStem	—	100.0	None	—
A0A494B953	Nedd4l	LWIEFESEK	Cerebellum	—	100.0	None	—
A0A494B953	Nedd4l	LWIEFESEK	MockWholeBrain	—	100.0	None	—
A0A494B953	Nedd4l	PFFIDHNTK	Cerebellum	—	100.0	None	—
A0A494B953	Nedd4l	PFFIDHNTK	Cerebrum	—	100.0	None	—
A0A494B953	Nedd4l	PFFIDHNTK	MockWholeBrain	—	100.0	None	—
A0A494B953	Nedd4l	SLSSPTVTLSAPLEGAK	Cerebrum	—	100.0	None	—
A0A494B953	Nedd4l	TFYIDHNSK	BrainStem	—	100.0	None	—
A0A494B953	Nedd4l	TFYIDHNSK	Cerebrum	—	100.0	None	—
A0A494B953	Nedd4l	VAGLAVFHGK	BrainStem	—	100.0	None	—
A0A494B953	Nedd4l	VAGLAVFHGK	Cerebellum	—	100.0	None	—
A0A494B953	Nedd4l	VAGLAVFHGK	Cerebrum	—	100.0	None	—
A0A494B953	Nedd4l	VAGLAVFHGK	MockWholeBrain	—	100.0	None	—
A0A494B953	Nedd4l	VVSGIDLAK	BrainStem	—	100.0	None	—
A0A494B9I3	Phf1	SSQLLSALNSHK	Cerebellum	—	100.0	None	—
A0A494B9K4	Add3	TEEVLSPDGSPSK	BrainStem	—	100.0	None	—
A0A494B9V8	Ptar1	ELILSGTLSPIK	BrainStem	—	100.0	None	—
A0A494B9V8	Ptar1	ELILSGTLSPIK	Cerebellum	—	100.0	None	—
A0A494B9V8	Ptar1	ELILSGTLSPIK	Cerebrum	—	100.0	None	—
A0A494B9V8	Ptar1	FLLPYVHNK	Cerebellum	—	100.0	None	—
A0A494B9V8	Ptar1	FLLPYVHNK	Cerebrum	—	100.0	None	—
A0A494B9V8	Ptar1	IWVLQNVAK	BrainStem	—	100.0	None	—
A0A494B9V8	Ptar1	IWVLQNVAK	Cerebellum	—	100.0	None	—
A0A494B9V8	Ptar1	IWVLQNVAK	Cerebrum	—	100.0	None	—
A0A494B9V8	Ptar1	IWVLQNVAK	MockWholeBrain	—	100.0	None	—

SysQuan Mouse Database

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