SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O35226	Psmd4	AAAASAAEAGIATPGTEDSDDALLK	TailSkin	—	100.0	None	—
O35226	Psmd4	AAAASAAEAGIATPGTEDSDDALLK	Thymus	—	100.0	None	—
O35226	Psmd4	AAAASAAEAGIATPGTEDSDDALLK	Thyroid	—	100.0	None	—
O35226	Psmd4	AAAASAAEAGIATPGTEDSDDALLK	Trachea	—	100.0	None	—
O35226	Psmd4	LTAFVNTLNGK	BrainStem	—	100.0	None	—
O35226	Psmd4	LTAFVNTLNGK	Cerebellum	—	100.0	None	—
O35226	Psmd4	LTAFVNTLNGK	Cerebrum	—	100.0	None	—
O35226	Psmd4	LTAFVNTLNGK	lung	—	100.0	None	—
O35226	Psmd4	LTAFVNTLNGK	Muscle	—	100.0	None	—
O35226	Psmd4	VAHLALK	BrainStem	—	100.0	None	—
O35226	Psmd4	VAHLALK	Cerebellum	—	100.0	None	—
O35226	Psmd4	VAHLALK	Cerebrum	—	100.0	None	—
O35226	Psmd4	VAHLALK	liver	—	100.0	None	—
O35226	Psmd4	VAHLALK	lung	—	100.0	None	—
O35226	Psmd4	VAHLALK	Muscle	—	100.0	None	—
O35226	Psmd4	VNVDIINFGEEEVNTEK	Cerebellum	—	100.0	None	—
O35226	Psmd4	VNVDIINFGEEEVNTEK	Cerebrum	—	100.0	None	—
O35226	Psmd4	VNVDIINFGEEEVNTEK	Gallbladder	—	100.0	None	—
O35226	Psmd4	VNVDIINFGEEEVNTEK	Muscle	—	100.0	None	—
O35226	Psmd4	VNVDIINFGEEEVNTEK	SalivaryGland	—	100.0	None	—
O35226	Psmd4	VNVDIINFGEEEVNTEK	SmallIntestines	—	100.0	None	—
O35226	Psmd4	VNVDIINFGEEEVNTEK	TailSkin	—	100.0	None	—
O35227	Adam7	SALIDVENIEEHNAEDHHK	Spermatozoa	—	100.0	None	—
O35227	Adam7	VPSSFSSPHYITLK	Spermatozoa	—	100.0	None	—
O35227	Adam7	YSDDGEHLVYK	Spermatozoa	—	100.0	None	—
O35231	Kifc3	ALQLLFSEVQEK	kidney	—	100.0	None	—
O35239	Ptpn9	LKPHEEPLR	BrainStem	—	100.0	None	—
O35239	Ptpn9	LKPHEEPLR	Cerebellum	—	100.0	None	—
O35239	Ptpn9	LKPHEEPLR	Cerebrum	—	100.0	None	—
O35239	Ptpn9	QFLEEINK	BrainStem	—	100.0	None	—
O35239	Ptpn9	QFLEEINK	Cerebellum	—	100.0	None	—
O35239	Ptpn9	QFLEEINK	Cerebrum	—	100.0	None	—
O35239	Ptpn9	QFLEEINK	liver	—	100.0	None	—
O35239	Ptpn9	QFLEEINK	lung	—	100.0	None	—
O35239	Ptpn9	VPYSIISLLLK	Cerebrum	—	100.0	None	—
O35242	Nsmaf	LYSGSWDSTVK	Heart	—	100.0	None	—
O35242	Nsmaf	LYSGSWDSTVK	lung	—	100.0	None	—
O35242	Nsmaf	LYSGSWDSTVK	Muscle	—	100.0	None	—
O35242	Nsmaf	SVIFEPDAISQPILK	Cerebellum	—	100.0	None	—
O35242	Nsmaf	SVIFEPDAISQPILK	liver	—	100.0	None	—
O35242	Nsmaf	SVIFEPDAISQPILK	lung	—	100.0	None	—
O35242	Nsmaf	SVIFEPDAISQPILK	Muscle	—	100.0	None	—
O35242	Nsmaf	SVIFEPDAISQPILK	Spleen	—	100.0	None	—
O35245	Pkd2	FTEGSFLDGLYWK	liver	—	100.0	None	—
O35245	Pkd2	FTEGSFLDGLYWK	lung	—	100.0	None	—
O35245	Pkd2	GHTDAEIEAIFTK	lung	—	100.0	None	—
O35245	Pkd2	LLAEFPATGGVVPSWQFQPVK	BrainStem	—	100.0	None	—
O35245	Pkd2	LLAEFPATGGVVPSWQFQPVK	lung	—	100.0	None	—
O35250	Exoc7	ALEDFADNIK	Heart	—	100.0	None	—
O35250	Exoc7	ALEDFADNIK	liver	—	100.0	None	—

SysQuan Mouse Database

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