SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
A0A2R8VHR3	Masp1	SEIELEK	Cerebrum	—	100.0	None	—
A0A2R8VHV1	Phf20l1	GQDWIALVK	Cerebellum	—	100.0	None	—
A0A2R8VHV1	Phf20l1	GQDWIALVK	Cerebrum	—	100.0	None	—
A0A2R8VHV1	Phf20l1	GQDWIALVK	MockWholeBrain	—	100.0	None	—
A0A2R8VHV1	Phf20l1	ITGLLASK	Cerebellum	—	100.0	None	—
A0A2R8VHV1	Phf20l1	ITGLLASK	Cerebrum	—	100.0	None	—
A0A2R8VHV1	Phf20l1	ITGLLASK	MockWholeBrain	—	100.0	None	—
A0A2R8VHX1	Ndufa6	AAASTSVKPIFSR	BrainStem	—	100.0	None	—
A0A2R8VI25	Pcbp2	PSSSPVIFAGGQLTK	BrainStem	—	100.0	None	—
A0A2R8VI25	Pcbp2	PSSSPVIFAGGQLTK	Cerebrum	—	100.0	None	—
A0A2R8VI94	Cd47	LVSWFSPNEK	BrainStem	—	100.0	None	—
A0A2R8VK70	Cd47	AVEEPLNAFK	Cerebellum	—	100.0	None	—
A0A2R8VK70	Cd47	AVEEPLNAFK	Cerebrum	—	100.0	None	—
A0A2R8VK70	Cd47	FGILTLK	BrainStem	—	100.0	None	—
A0A2R8VK70	Cd47	ISVSDLINGIASLK	Cerebellum	—	100.0	None	—
A0A2R8VK70	Cd47	ISVSDLINGIASLK	Cerebrum	—	100.0	None	—
A0A2R8VKG2	D430041D05Rik	AKPVQGFDYAK	Cerebrum	—	100.0	None	—
A0A2R8VKG2	D430041D05Rik	AKPVQGFDYAK	MockWholeBrain	—	100.0	None	—
A0A2R8VKG2	D430041D05Rik	DPAELTYYTLYNGKPLLGTAAAK	Cerebrum	—	100.0	None	—
A0A2R8VKG2	D430041D05Rik	DTAQDGSAIK	MockWholeBrain	—	100.0	None	—
A0A2R8VKG2	D430041D05Rik	GQESSAALNGEVNK	Cerebrum	—	100.0	None	—
A0A2R8VKG2	D430041D05Rik	GYYDFPPVEAGK	Cerebrum	—	100.0	None	—
A0A2R8VKG2	D430041D05Rik	NVTASDEEEGAGLFDSAGK	Cerebrum	—	100.0	None	—
A0A2R8VKG2	D430041D05Rik	QHTPNLQSVAVLASPWKPQPAGAFQLK	Cerebrum	—	100.0	None	—
A0A2R8VKG2	D430041D05Rik	SSLTTALAK	Cerebrum	—	100.0	None	—
A0A2R8W6P0	Cd47	AVEEPLNAFK	Cerebrum	—	100.0	None	—
A0A2R8W6P0	Cd47	FGILTLK	BrainStem	—	100.0	None	—
A0A2R8W6P0	Cd47	FGILTLK	Cerebellum	—	100.0	None	—
A0A2R8W6P0	Cd47	FGILTLK	Cerebrum	—	100.0	None	—
A0A2R8W6P0	Cd47	FGILTLK	MockWholeBrain	—	100.0	None	—
A0A2R8W6P0	Cd47	ISVSDLINGIASLK	BrainStem	—	100.0	None	—
A0A2R8W6P0	Cd47	ISVSDLINGIASLK	Cerebrum	—	100.0	None	—
A0A2R8W6P0	Cd47	ISVSDLINGIASLK	MockWholeBrain	—	100.0	None	—
A0A2R8W6P0	Cd47	LVSWFSPNEK	Cerebellum	—	100.0	None	—
A0A2R8W6P0	Cd47	LVSWFSPNEK	Cerebrum	—	100.0	None	—
A0A2R8W6P0	Cd47	LVSWFSPNEK	MockWholeBrain	—	100.0	None	—
A0A2R8W6P0	Cd47	SYIFIYDGNK	Cerebellum	—	100.0	None	—
A0A2R8W6R6	Prph	DGLAEDLAALK	Cerebellum	—	100.0	None	—
A0A2R8W6R6	Prph	DGLAEDLAALK	Cerebrum	—	100.0	None	—
A0A2R8W6R6	Prph	ISVPVHSFASLSLK	Cerebellum	—	100.0	None	—
A0A2R8W6R6	Prph	ISVPVHSFASLSLK	Cerebrum	—	100.0	None	—
A0A2R8W6V9	Septin3	SELVPEPRPK	Cerebellum	—	100.0	None	—
A0A2R8W6Y5	Larp4	EIPETTPVEEVK	Cerebellum	—	100.0	None	—
A0A2S1B6B8	Syngap1	EEVASALVHILQSTGK	Cerebrum	—	100.0	None	—
A0A2S1B6B8	Syngap1	EGSIGGSGGSGGGGGGGLKPSITK	Cerebrum	—	100.0	None	—
A0A2S1B6B8	Syngap1	EKPPPPPPGGGK	Cerebrum	—	100.0	None	—
A0A2S1B6B8	Syngap1	ELSTLHALLWEVLPQLSK	Cerebrum	—	100.0	None	—
A0A2S1B6B8	Syngap1	SQQLTVSAAQK	Cerebrum	—	100.0	None	—
A0A2S1B6B8	Syngap1	SQQLTVSAAQKPR	Cerebrum	—	100.0	None	—
A0A2S1B6B8	Syngap1	VIQNLANFSK	Cerebrum	—	100.0	None	—

SysQuan Mouse Database

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