SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P35283	Rab12	YASEDAELLLVGNK	lung	—	100.0	MRM	—
P35293	Rab18	IIQTPGLWESENQNK	BrainStem	—	100.0	MRM	—
P35293	Rab18	IIQTPGLWESENQNK	Cerebrum	—	100.0	MRM	—
P35293	Rab18	IIQTPGLWESENQNK	liver	—	100.0	MRM	—
P35293	Rab18	IIQTPGLWESENQNK	Spleen	—	100.0	MRM	—
P35293	Rab18	IIQTPGLWESENQNK	TailSkin	—	100.0	MRM	—
P35436	Grin2a	FSYIPEAK	Cerebellum	—	100.0	MRM	—
P35486	Pdha1	AAASTDYYK	BrainStem	—	100.0	MRM	—
P35486	Pdha1	AAASTDYYK	Cerebrum	—	100.0	MRM	—
P35486	Pdha1	AAASTDYYK	kidney	—	100.0	MRM	—
P35486	Pdha1	AAASTDYYK	lung	—	100.0	MRM	—
P35486	Pdha1	AAASTDYYK	Muscle	—	100.0	MRM	—
P35486	Pdha1	GANQWIK	Cerebrum	—	100.0	MRM	—
P35486	Pdha1	GANQWIK	kidney	—	100.0	MRM	—
P35486	Pdha1	GANQWIK	Muscle	—	100.0	MRM	—
P35492	Hal	TVVYGITTGFGK	liver	—	100.0	MRM	—
P35492	Hal	TVVYGITTGFGK	TailSkin	—	100.0	MRM	—
P35492	Hal	VWEVAAPYIEK	liver	—	100.0	MRM	—
P35492	Hal	VWEVAAPYIEK	TailSkin	—	100.0	MRM	—
P35550	Fbl	NLVPGESVYGEK	Cerebellum	—	100.0	MRM	—
P35550	Fbl	NLVPGESVYGEK	Cerebrum	—	100.0	MRM	—
P35550	Fbl	NLVPGESVYGEK	lung	—	100.0	MRM	—
P35550	Fbl	NLVPGESVYGEK	MockWholeBrain	—	100.0	MRM	—
P35564	Canx	RPDADLK	BrainStem	—	100.0	MRM	—
P35564	Canx	RPDADLK	Cerebellum	—	100.0	MRM	—
P35564	Canx	RPDADLK	Cerebrum	—	100.0	MRM	—
P35564	Canx	RPDADLK	Heart	—	100.0	MRM	—
P35564	Canx	RPDADLK	kidney	—	100.0	MRM	—
P35564	Canx	RPDADLK	liver	—	100.0	MRM	—
P35564	Canx	RPDADLK	lung	—	100.0	MRM	—
P35564	Canx	RPDADLK	MockWholeBrain	—	100.0	MRM	—
P35585	Ap1m1	ILQEYITQEGHK	BoneMarrow	—	100.0	MRM	—
P35585	Ap1m1	ILQEYITQEGHK	BrainStem	—	100.0	MRM	—
P35585	Ap1m1	ILQEYITQEGHK	kidney	—	100.0	MRM	—
P35585	Ap1m1	ILQEYITQEGHK	liver	—	100.0	MRM	—
P35585	Ap1m1	ILQEYITQEGHK	lung	—	100.0	MRM	—
P35585	Ap1m1	ILQEYITQEGHK	Pancreas	—	100.0	MRM	—
P35700	Prdx1	LVQAFQFTDK	BoneMarrow	—	100.0	MRM	—
P35700	Prdx1	LVQAFQFTDK	Cerebrum	—	100.0	MRM	—
P35700	Prdx1	LVQAFQFTDK	kidney	—	100.0	MRM	—
P35700	Prdx1	LVQAFQFTDK	lung	—	100.0	MRM	—
P35700	Prdx1	LVQAFQFTDK	MockWholeBrain	—	100.0	MRM	—
P35700	Prdx1	LVQAFQFTDK	Muscle	—	100.0	MRM	—
P35700	Prdx1	LVQAFQFTDK	Pancreas	—	100.0	MRM	—
P35700	Prdx1	LVQAFQFTDK	plasma	—	100.0	MRM	—
P35700	Prdx1	TIAQDYGVLK	Cerebellum	—	100.0	MRM	—
P35700	Prdx1	TIAQDYGVLK	Pancreas	—	100.0	MRM	—
P35822	Ptprk	SLQGTSFENK	liver	—	100.0	MRM	—
P35822	Ptprk	SLQGTSFENK	lung	—	100.0	MRM	—
P35831	Ptpn12	TPSQDSDYINANFIK	BrainStem	—	100.0	MRM	—

SysQuan Mouse Database

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