SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
A0A338P6S3	Smpd4	LAQLITQAK	kidney	—	100.0	MRM+PRM	—
A0A338P6S3	Smpd4	LAQLITQAK	liver	—	100.0	MRM+PRM	—
A0A411ACY8	Cacna2d1	EDFASNEVVYYNAK	BrainStem	—	100.0	MRM+PRM	—
A0A411ACY8	Cacna2d1	EDFASNEVVYYNAK	Cerebrum	—	100.0	MRM+PRM	—
A0A411ACY8	Cacna2d1	EDFASNEVVYYNAK	MockWholeBrain	—	100.0	MRM+PRM	—
A0A7P0A156	Nadk2	VTNEYNESLLYSPEEPK	Cerebellum	—	100.0	MRM+PRM	—
A0A7P0A156	Nadk2	VTNEYNESLLYSPEEPK	SmallIntestines	—	100.0	MRM+PRM	—
A0A991ELE1	Ptprg	DNSALDPIIHGLK	BrainStem	—	100.0	MRM+PRM	—
A0A991ELE1	Ptprg	DNSALDPIIHGLK	Cerebrum	—	100.0	MRM+PRM	—
A0A991ELE1	Ptprg	DNSALDPIIHGLK	kidney	—	100.0	MRM+PRM	—
A0AA74KSY4	Hdgf	DLFPYEESK	Cerebellum	—	100.0	MRM+PRM	—
A0AA74KSY4	Hdgf	DLFPYEESK	Cerebrum	—	100.0	MRM+PRM	—
A0AA74KSY4	Hdgf	DLFPYEESK	MockWholeBrain	—	100.0	MRM+PRM	—
A0AAQ4VMY7	Dpysl2	GSPLVVISQGK	Cerebellum	—	100.0	MRM+PRM	—
A0AAQ4VMY7	Dpysl2	GSPLVVISQGK	MockWholeBrain	—	100.0	MRM+PRM	—
A0AAQ4VMY7	Dpysl2	GSPLVVISQGK	SmallIntestines	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	BrainStem	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	Cerebellum	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	Cerebrum	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	kidney	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	liver	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	MockWholeBrain	—	100.0	MRM+PRM	—
A1A557	Comp	DTDLDGFPDEK	plasma	—	100.0	MRM+PRM	—
A1BN54	Actn1	DYETATLSEIK	kidney	—	100.0	MRM+PRM	—
A2ABY3	Pcyt2	DGSDPYQEPK	liver	—	100.0	MRM+PRM	—
A2AJ15	Man1b1	ADSYYEYLLK	BrainStem	—	100.0	MRM+PRM	—
A2AJ15	Man1b1	ADSYYEYLLK	Cerebellum	—	100.0	MRM+PRM	—
A2AJ15	Man1b1	ADSYYEYLLK	Cerebrum	—	100.0	MRM+PRM	—
A2AJ15	Man1b1	ADSYYEYLLK	kidney	—	100.0	MRM+PRM	—
A2AJ15	Man1b1	ADSYYEYLLK	liver	—	100.0	MRM+PRM	—
A2AMW0	Capzb	STLNEIYFGK	Pancreas	—	100.0	MRM+PRM	—
A2ATU0	Dhtkd1	KPLIVASPK	kidney	—	100.0	MRM+PRM	—
A2NHM3	Igkc	FSGSGSGTDFTLK	BoneMarrow	—	100.0	MRM+PRM	—
A2NHM3	Igkc	FSGSGSGTDFTLK	plasma	—	100.0	MRM+PRM	—
A6H5Y3	Mtr	YSAPVIHVLDASK	BrainStem	—	100.0	MRM+PRM	—
A6H5Y3	Mtr	YSAPVIHVLDASK	Cerebellum	—	100.0	MRM+PRM	—
A6X935	Itih4	FKPTLSQQQK	kidney	—	100.0	MRM+PRM	—
A6ZI44	Aldoa	GILAADESTGSIAK	Cerebellum	—	100.0	MRM+PRM	—
B1ATS5	Atp2a3	VDQSILTGESVSVTK	Cerebellum	—	100.0	MRM+PRM	—
B1AZP2	Dlgap4	ENNLSEEVLGK	Cerebrum	—	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	BoneMarrow	—	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	BrainStem	—	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	Cerebellum	—	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	Cerebrum	—	100.0	MRM+PRM	—
B2RQC6	Cad	ASDPGLPAEEPK	BrainStem	—	100.0	MRM+PRM	—
B2RQC6	Cad	ASDPGLPAEEPK	Cerebrum	—	100.0	MRM+PRM	—
B2RQC6	Cad	ASDPGLPAEEPK	MockWholeBrain	—	100.0	MRM+PRM	—
B2RQC6	Cad	ASDPGLPAEEPK	Pancreas	—	100.0	MRM+PRM	—
B2Z893	Pfkfb2	HGESEFNLLGK	liver	—	100.0	MRM+PRM	—
B7FAU9	Flna	GAGTGGLGLAVEGPSEAK	kidney	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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