SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P05063	Aldoc	GILAADESVGSMAK	kidney	1.1	92.4	MRM	['Meth']
Q01279	Egfr	YSFGATCVK	liver	1.7	92.4	MRM	['Cys']
Q924Y0	Bbox1	EFVDLMNSK	liver	0.7	85.3	MRM	['Meth']
Q91W43	Gldc	SAHGTNPASAHMAGMK	liver	11.8	83.1	MRM	['Meth']
A7MCT6	Etnk2	LIALEMAK	liver	0.2	—	MRM	['Meth']
P05063	Aldoc	GILAADESVGSMAK	kidney	1.1	—	MRM	['Meth']
P10518	Alad	VSVMSYSAK	liver	3.0	—	MRM	['Meth']
Q9CQA3	Sdhb	IYPLPHMYVIK	liver	1.4	—	MRM	['Meth']
Q9D826	Pipox	ILYELSMK	liver	0.7	—	MRM	['Meth']
A0A087WQI6	Gsta3	AILNYIASK	liver	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	EATIPGHLNSYTIK	plasma	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	IGDQWDK	liver	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	IGDQWDK	plasma	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	ITYGETGGNSPVQEFTVPGSK	liver	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	ITYGETGGNSPVQEFTVPGSK	plasma	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	ITYGETGGNSPVQEFTVPGSK	Spleen	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	SYTITGLQPGTDYK	Cerebrum	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	VGDTYERPK	liver	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	VGDTYERPK	plasma	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	YEKPGSPPR	liver	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	YEKPGSPPR	plasma	—	100.0	MRM+PRM	—
A0A087WRG0	Pfkfb2	HGESEFNLLGK	BrainStem	—	100.0	MRM+PRM	—
A0A087WRG0	Pfkfb2	HGESEFNLLGK	Cerebellum	—	100.0	MRM+PRM	—
A0A087WRG0	Pfkfb2	HGESEFNLLGK	MockWholeBrain	—	100.0	MRM+PRM	—
A0A087WS16	Col6a3	LLVLITGGK	BrainStem	—	100.0	MRM+PRM	—
A0A087WS16	Col6a3	LLVLITGGK	Cerebellum	—	100.0	MRM+PRM	—
A0A087WS16	Col6a3	LLVLITGGK	Cerebrum	—	100.0	MRM+PRM	—
A0A087WS16	Col6a3	LLVLITGGK	Muscle	—	100.0	MRM+PRM	—
A0A087WS16	Col6a3	LLVLITGGK	Pancreas	—	100.0	MRM+PRM	—
A0A087WS16	Col6a3	LLVLITGGK	SmallIntestines	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	ITYGETGGNSPVQEFTVPGSK	BrainStem	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	ITYGETGGNSPVQEFTVPGSK	liver	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	SYTITGLQPGTDYK	Cerebellum	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	VGDTYERPK	kidney	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	YEKPGSPPR	kidney	—	100.0	MRM+PRM	—
A0A0J9YUQ8	Gsn	QTQVSVLPEGGETPLFK	BrainStem	—	100.0	MRM+PRM	—
A0A0J9YUQ8	Gsn	QTQVSVLPEGGETPLFK	Cerebellum	—	100.0	MRM+PRM	—
A0A0N4SVB8	Arl8b	DLPNALDEK	kidney	—	100.0	MRM+PRM	—
A0A0R4J005	Lims1	VIEGDVVSALNK	Spleen	—	100.0	MRM+PRM	—
A0A0R4J049	Prmt5	YSQYQQAIYK	BrainStem	—	100.0	MRM+PRM	—
A0A0R4J049	Prmt5	YSQYQQAIYK	Cerebrum	—	100.0	MRM+PRM	—
A0A0R4J049	Prmt5	YSQYQQAIYK	Spermatozoa	—	100.0	MRM+PRM	—
A0A1B0GRV0	Bpnt1	EEDLVVWVDPLDGTK	BrainStem	—	100.0	MRM+PRM	—
A0A1B0GRV0	Bpnt1	EEDLVVWVDPLDGTK	Cerebellum	—	100.0	MRM+PRM	—
A0A1B0GRV0	Bpnt1	EEDLVVWVDPLDGTK	Cerebrum	—	100.0	MRM+PRM	—
A0A1B0GRV0	Bpnt1	EEDLVVWVDPLDGTK	kidney	—	100.0	MRM+PRM	—
A0A1B0GRV0	Bpnt1	EEDLVVWVDPLDGTK	liver	—	100.0	MRM+PRM	—
A0A1L1SV25	Actn4	LSGSNPYTTVTPQIINSK	BrainStem	—	100.0	MRM+PRM	—
A0A1L1SV25	Actn4	LSGSNPYTTVTPQIINSK	Cerebrum	—	100.0	MRM+PRM	—
A0A2I3BPT1	App	YLETPGDENEHAHFQK	BrainStem	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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