SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O70404	Vamp8	TEDLEATSEHFK	Cerebellum	—	100.0	MRM	—
O70404	Vamp8	TEDLEATSEHFK	Heart	—	100.0	MRM	—
O70404	Vamp8	TEDLEATSEHFK	liver	—	100.0	MRM	—
O70404	Vamp8	TEDLEATSEHFK	lung	—	100.0	MRM	—
O70435	Psma3	IIYIVHDEVK	BoneMarrow	—	100.0	MRM	—
O70435	Psma3	IIYIVHDEVK	Cerebellum	—	100.0	MRM	—
O70435	Psma3	IIYIVHDEVK	Heart	—	100.0	MRM	—
O70435	Psma3	IIYIVHDEVK	kidney	—	100.0	MRM	—
O70435	Psma3	IIYIVHDEVK	lung	—	100.0	MRM	—
O70435	Psma3	IIYIVHDEVK	Pancreas	—	100.0	MRM	—
O70435	Psma3	IIYIVHDEVK	plasma	—	100.0	MRM	—
O70435	Psma3	IIYIVHDEVK	SmallIntestines	—	100.0	MRM	—
O70475	Ugdh	IIDSLFNTVTDK	Cerebrum	—	100.0	MRM	—
O70475	Ugdh	IIDSLFNTVTDK	Heart	—	100.0	MRM	—
O70475	Ugdh	IIDSLFNTVTDK	liver	—	100.0	MRM	—
O70475	Ugdh	IIDSLFNTVTDK	lung	—	100.0	MRM	—
O70475	Ugdh	ILTTNTWSSELSK	BrainStem	—	100.0	MRM	—
O70475	Ugdh	ILTTNTWSSELSK	Cerebellum	—	100.0	MRM	—
O70475	Ugdh	ILTTNTWSSELSK	Cerebrum	—	100.0	MRM	—
O70475	Ugdh	ILTTNTWSSELSK	Heart	—	100.0	MRM	—
O70475	Ugdh	ILTTNTWSSELSK	kidney	—	100.0	MRM	—
O70475	Ugdh	ILTTNTWSSELSK	lung	—	100.0	MRM	—
O70475	Ugdh	ILTTNTWSSELSK	MockWholeBrain	—	100.0	MRM	—
O70475	Ugdh	INAWNSPTLPIYEPGLK	BoneMarrow	—	100.0	MRM	—
O70475	Ugdh	INAWNSPTLPIYEPGLK	BrainStem	—	100.0	MRM	—
O70475	Ugdh	INAWNSPTLPIYEPGLK	Cerebellum	—	100.0	MRM	—
O70475	Ugdh	INAWNSPTLPIYEPGLK	Cerebrum	—	100.0	MRM	—
O70475	Ugdh	INAWNSPTLPIYEPGLK	SmallIntestines	—	100.0	MRM	—
O70475	Ugdh	INAWNSPTLPIYEPGLK	TailSkin	—	100.0	MRM	—
O70566	Diaph2	EVLDLFEK	Heart	—	100.0	MRM	—
O70566	Diaph2	EVLDLFEK	kidney	—	100.0	MRM	—
O88342	Wdr1	DYSGQGVVK	BrainStem	—	100.0	MRM	—
O88342	Wdr1	DYSGQGVVK	Heart	—	100.0	MRM	—
O88342	Wdr1	IWDTTQK	BoneMarrow	—	100.0	MRM	—
O88342	Wdr1	IWDTTQK	BrainStem	—	100.0	MRM	—
O88342	Wdr1	IWDTTQK	Cerebellum	—	100.0	MRM	—
O88342	Wdr1	IWDTTQK	Cerebrum	—	100.0	MRM	—
O88342	Wdr1	IWDTTQK	kidney	—	100.0	MRM	—
O88342	Wdr1	IWDTTQK	SmallIntestines	—	100.0	MRM	—
O88342	Wdr1	IWDTTQK	Spleen	—	100.0	MRM	—
O88342	Wdr1	YEYQPFAGK	BoneMarrow	—	100.0	MRM	—
O88342	Wdr1	YEYQPFAGK	Heart	—	100.0	MRM	—
O88342	Wdr1	YEYQPFAGK	liver	—	100.0	MRM	—
O88342	Wdr1	YEYQPFAGK	Muscle	—	100.0	MRM	—
O88342	Wdr1	YEYQPFAGK	SmallIntestines	—	100.0	MRM	—
O88428	Papss2	DLYEPTHGGK	kidney	—	100.0	MRM	—
O88428	Papss2	DLYEPTHGGK	liver	—	100.0	MRM	—
O88428	Papss2	DLYEPTHGGK	lung	—	100.0	MRM	—
O88428	Papss2	LTPLELK	BrainStem	—	100.0	MRM	—
O88428	Papss2	LTPLELK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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