SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P14131	Rps16	LLEPVLLLGK	Cerebrum	—	100.0	MRM	—
P14131	Rps16	LLEPVLLLGK	liver	—	100.0	MRM	—
P14148	Rpl7	AGNFYVPAEPK	Cerebellum	—	100.0	MRM	—
P14148	Rpl7	AGNFYVPAEPK	liver	—	100.0	MRM	—
P14148	Rpl7	SVNELIYK	BrainStem	—	100.0	MRM	—
P14148	Rpl7	SVNELIYK	Cerebellum	—	100.0	MRM	—
P14148	Rpl7	SVNELIYK	Cerebrum	—	100.0	MRM	—
P14148	Rpl7	SVNELIYK	MockWholeBrain	—	100.0	MRM	—
P14152	Mdh1	EVGVYEALK	Cerebellum	—	100.0	MRM	—
P14152	Mdh1	NVIIWGNHSSTQYPDVNHAK	BrainStem	—	100.0	MRM	—
P14152	Mdh1	NVIIWGNHSSTQYPDVNHAK	Cerebellum	—	100.0	MRM	—
P14152	Mdh1	NVIIWGNHSSTQYPDVNHAK	Cerebrum	—	100.0	MRM	—
P14152	Mdh1	NVIIWGNHSSTQYPDVNHAK	liver	—	100.0	MRM	—
P14152	Mdh1	NVIIWGNHSSTQYPDVNHAK	MockWholeBrain	—	100.0	MRM	—
P14211	Calr	FVLSSGK	BrainStem	—	100.0	MRM	—
P14211	Calr	FVLSSGK	Cerebellum	—	100.0	MRM	—
P14211	Calr	FVLSSGK	Cerebrum	—	100.0	MRM	—
P14211	Calr	FVLSSGK	liver	—	100.0	MRM	—
P14211	Calr	FVLSSGK	MockWholeBrain	—	100.0	MRM	—
P14685	Psmd3	ELDTVTLEDIK	Cerebellum	—	100.0	MRM	—
P14685	Psmd3	FNQVLDQFGEK	Cerebellum	—	100.0	MRM	—
P14733	Lmnb1	DAALATALGDK	Cerebrum	—	100.0	MRM	—
P14869	Rplp0	GHLENNPALEK	BrainStem	—	100.0	MRM	—
P14869	Rplp0	GHLENNPALEK	Cerebellum	—	100.0	MRM	—
P14869	Rplp0	GHLENNPALEK	Cerebrum	—	100.0	MRM	—
P14869	Rplp0	GHLENNPALEK	liver	—	100.0	MRM	—
P14869	Rplp0	IIQLLDDYPK	Cerebellum	—	100.0	MRM	—
P14869	Rplp0	IIQLLDDYPK	liver	—	100.0	MRM	—
P15116	Cdh2	DVHEGQPLLNVK	BrainStem	—	100.0	MRM	—
P15116	Cdh2	DVHEGQPLLNVK	Cerebrum	—	100.0	MRM	—
P15532	Nme1	TFIAIKPDGVQR	Cerebellum	—	100.0	MRM	—
P15532	Nme1	TFIAIKPDGVQR	Cerebrum	—	100.0	MRM	—
P15864	H1-2	ASGPPVSELITK	Cerebellum	—	100.0	MRM	—
P16125	Ldhb	SADTLWDIQK	BrainStem	—	100.0	MRM	—
P16125	Ldhb	SADTLWDIQK	Cerebellum	—	100.0	MRM	—
P16125	Ldhb	SADTLWDIQK	MockWholeBrain	—	100.0	MRM	—
P16254	Srp14	ISTVVSSK	BrainStem	—	100.0	MRM	—
P16254	Srp14	ISTVVSSK	Cerebellum	—	100.0	MRM	—
P16330	Cnp	NQWQLSADDLK	BrainStem	—	100.0	MRM	—
P16330	Cnp	NQWQLSADDLK	Cerebellum	—	100.0	MRM	—
P16331	Pah	LLPLELEK	liver	—	100.0	MRM	—
P16332	Mmut	AAVQVLDDIEK	Cerebellum	—	100.0	MRM	—
P16332	Mmut	AAVQVLDDIEK	Cerebrum	—	100.0	MRM	—
P16332	Mmut	IDSGSEVIVGVNK	BrainStem	—	100.0	MRM	—
P16332	Mmut	IDSGSEVIVGVNK	Cerebellum	—	100.0	MRM	—
P16460	Ass1	NQAPPGLYTK	Cerebrum	—	100.0	MRM	—
P16460	Ass1	QHGIPIPVTPK	BrainStem	—	100.0	MRM	—
P16460	Ass1	QHGIPIPVTPK	Cerebellum	—	100.0	MRM	—
P16460	Ass1	QHGIPIPVTPK	MockWholeBrain	—	100.0	MRM	—
P16627	Hspa1l	GTLEPVEK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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