SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
F7ACR9	Macf1	ELEEAVTSALQQETEK	Spleen	—	100.0	MRM	—
F7BJK1	Pcdh1	VTVLDTNDNAPK	BrainStem	—	100.0	MRM	—
F7BJK1	Pcdh1	VTVLDTNDNAPK	Cerebellum	—	100.0	MRM	—
F7BJK1	Pcdh1	VTVLDTNDNAPK	Cerebrum	—	100.0	MRM	—
F7BJK1	Pcdh1	VTVLDTNDNAPK	Heart	—	100.0	MRM	—
F7BJK1	Pcdh1	YFLQTTTPLDYEK	BrainStem	—	100.0	MRM	—
F7BJK1	Pcdh1	YFLQTTTPLDYEK	Cerebellum	—	100.0	MRM	—
F7BJK1	Pcdh1	YFLQTTTPLDYEK	Cerebrum	—	100.0	MRM	—
F7BJK1	Pcdh1	YFLQTTTPLDYEK	Heart	—	100.0	MRM	—
F7BJK1	Pcdh1	YFLQTTTPLDYEK	kidney	—	100.0	MRM	—
F7BJK1	Pcdh1	YFLQTTTPLDYEK	lung	—	100.0	MRM	—
F7BJK1	Pcdh1	YFLQTTTPLDYEK	MockWholeBrain	—	100.0	MRM	—
F7D3W5	Gm45837	LLQDLFPK	BrainStem	—	100.0	MRM	—
F7D3W5	Gm45837	LLQDLFPK	Cerebellum	—	100.0	MRM	—
F7D3W5	Gm45837	LLQDLFPK	Heart	—	100.0	MRM	—
F7D3W5	Gm45837	LLQDLFPK	kidney	—	100.0	MRM	—
F7D3W5	Gm45837	LLQDLFPK	MockWholeBrain	—	100.0	MRM	—
F8VPK0	Skic3	AALNELLK	BrainStem	—	100.0	MRM	—
F8VPK0	Skic3	AALNELLK	Cerebrum	—	100.0	MRM	—
F8VPK0	Skic3	AALNELLK	kidney	—	100.0	MRM	—
F8VPK0	Skic3	AALNELLK	liver	—	100.0	MRM	—
F8VPK5	Rock2	VIQQSLEQEEAEHK	Cerebellum	—	100.0	MRM	—
F8VPM7	Erc1	LSSTQQSLAEK	kidney	—	100.0	MRM	—
F8VPM7	Erc1	LSSTQQSLAEK	liver	—	100.0	MRM	—
F8VPM7	Erc1	LSSTQQSLAEK	lung	—	100.0	MRM	—
F8VPN4	Agl	LGPTLQGK	BoneMarrow	—	100.0	MRM	—
F8VPN4	Agl	LGPTLQGK	Cerebellum	—	100.0	MRM	—
F8VPN4	Agl	LGPTLQGK	Heart	—	100.0	MRM	—
F8VPN4	Agl	LGPTLQGK	kidney	—	100.0	MRM	—
F8VPN4	Agl	LGPTLQGK	Muscle	—	100.0	MRM	—
F8VPN4	Agl	SGSLAVDNADPILK	BoneMarrow	—	100.0	MRM	—
F8VPN4	Agl	SGSLAVDNADPILK	BrainStem	—	100.0	MRM	—
F8VPN4	Agl	SGSLAVDNADPILK	Cerebellum	—	100.0	MRM	—
F8VPN4	Agl	SGSLAVDNADPILK	liver	—	100.0	MRM	—
F8VPN4	Agl	SGSLAVDNADPILK	Muscle	—	100.0	MRM	—
F8VPN4	Agl	SGSLAVDNADPILK	SmallIntestines	—	100.0	MRM	—
F8VQC1	Srp72	VLANNSLSFEK	Cerebrum	—	100.0	MRM	—
F8VQC1	Srp72	VLANNSLSFEK	kidney	—	100.0	MRM	—
F8VQC1	Srp72	VLANNSLSFEK	liver	—	100.0	MRM	—
F8WGT1	Ahcyl2	SQVDHVIWPDGK	liver	—	100.0	MRM	—
F8WGT1	Ahcyl2	SVQVVSAAAAAK	Cerebrum	—	100.0	MRM	—
F8WGT1	Ahcyl2	SVQVVSAAAAAK	liver	—	100.0	MRM	—
F8WGT1	Ahcyl2	SVQVVSAAAAAK	lung	—	100.0	MRM	—
F8WGT1	Ahcyl2	VPEVELK	Cerebrum	—	100.0	MRM	—
F8WGT1	Ahcyl2	VPEVELK	lung	—	100.0	MRM	—
F8WIS9	Camk2a	DLKPENLLLASK	Muscle	—	100.0	MRM	—
F8WIT2	Anxa6	VFQEFIK	BrainStem	—	100.0	MRM	—
F8WIT2	Anxa6	VFQEFIK	SmallIntestines	—	100.0	MRM	—
G3UWD3	Bdh2	VIATDINESK	liver	—	100.0	MRM	—
G3UX26	Vdac2	YQLDPTASISAK	Cerebrum	—	100.0	MRM	—

SysQuan Mouse Database

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