SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q60864	Stip1	DAIHFYNK	Muscle	—	100.0	MRM+PRM	—
Q60864	Stip1	DAIHFYNK	Thymus	—	100.0	MRM+PRM	—
Q60864	Stip1	LAYINPDLALEEK	BoneMarrow	—	100.0	MRM+PRM	—
Q60864	Stip1	LAYINPDLALEEK	Cerebellum	—	100.0	MRM+PRM	—
Q60864	Stip1	LAYINPDLALEEK	Cerebrum	—	100.0	MRM+PRM	—
Q60864	Stip1	LAYINPDLALEEK	LargeIntestines	—	100.0	MRM+PRM	—
Q60864	Stip1	LAYINPDLALEEK	liver	—	100.0	MRM+PRM	—
Q60864	Stip1	LAYINPDLALEEK	lung	—	100.0	MRM+PRM	—
Q60864	Stip1	LAYINPDLALEEK	Muscle	—	100.0	MRM+PRM	—
Q60864	Stip1	LAYINPDLALEEK	plasma	—	100.0	MRM+PRM	—
Q60864	Stip1	LAYINPDLALEEK	TailSkin	—	100.0	MRM+PRM	—
Q60864	Stip1	LAYINPDLALEEK	Thyroid	—	100.0	MRM+PRM	—
Q60930	Vdac2	LTFDTTFSPNTGK	Cerebrum	—	100.0	MRM+PRM	—
Q60930	Vdac2	LTFDTTFSPNTGK	LargeIntestines	—	100.0	MRM+PRM	—
Q60930	Vdac2	LTFDTTFSPNTGK	liver	—	100.0	MRM+PRM	—
Q60930	Vdac2	LTFDTTFSPNTGK	lung	—	100.0	MRM+PRM	—
Q60930	Vdac2	LTFDTTFSPNTGK	SmallIntestines	—	100.0	MRM+PRM	—
Q60930	Vdac2	LTFDTTFSPNTGK	TailSkin	—	100.0	MRM+PRM	—
Q60930	Vdac2	YQLDPTASISAK	TailSkin	—	100.0	MRM+PRM	—
Q60931	Vdac3	LTLDTIFVPNTGK	BoneMarrow	—	100.0	MRM+PRM	—
Q60931	Vdac3	LTLDTIFVPNTGK	Pancreas	—	100.0	MRM+PRM	—
Q60931	Vdac3	LTLDTIFVPNTGK	Spleen	—	100.0	MRM+PRM	—
Q60932	Vdac1	GYGFGLIK	liver	—	100.0	MRM+PRM	—
Q60932	Vdac1	GYGFGLIK	TailSkin	—	100.0	MRM+PRM	—
Q60932	Vdac1	GYGFGLIK	Thymus	—	100.0	MRM+PRM	—
Q60932	Vdac1	WTEYGLTFTEK	Bladder	—	100.0	MRM+PRM	—
Q60932	Vdac1	WTEYGLTFTEK	BoneMarrow	—	100.0	MRM+PRM	—
Q60932	Vdac1	WTEYGLTFTEK	liver	—	100.0	MRM+PRM	—
Q60932	Vdac1	WTEYGLTFTEK	SciaticNerve	—	100.0	MRM+PRM	—
Q60950	Ybx1	GAEAANVTGPGGVPVQGSK	liver	—	100.0	MRM+PRM	—
Q60967	Papss1	DIVPVDASYEVK	Cerebellum	—	100.0	MRM+PRM	—
Q60967	Papss1	DIVPVDASYEVK	Cerebrum	—	100.0	MRM+PRM	—
Q60967	Papss1	DIVPVDASYEVK	liver	—	100.0	MRM+PRM	—
Q60967	Papss1	DIVPVDASYEVK	Muscle	—	100.0	MRM+PRM	—
Q60967	Papss1	DIVPVDASYEVK	SalivaryGland	—	100.0	MRM+PRM	—
Q60967	Papss1	DIVPVDASYEVK	SmallIntestines	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	BrainStem	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	Cerebellum	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	Cerebrum	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	Heart	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	kidney	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	LargeIntestines	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	liver	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	lung	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	Muscle	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	SalivaryGland	—	100.0	MRM+PRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	SmallIntestines	—	100.0	MRM+PRM	—
Q60994	Adipoq	IFYNQQNHYDGSTGK	AdrenalGland	—	100.0	MRM+PRM	—
Q60994	Adipoq	IFYNQQNHYDGSTGK	Bladder	—	100.0	MRM+PRM	—
Q60994	Adipoq	IFYNQQNHYDGSTGK	BoneMarrow	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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