SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
B7ZN23	Nrg3	EYVPTDLVDSK	BrainStem	—	100.0	MRM	—
B7ZN91	Itgal	YIIGIGK	lung	—	100.0	MRM	—
B7ZNH7	Col14a1	ESGVELFAIGVK	kidney	—	100.0	MRM	—
B7ZNH7	Col14a1	ESGVELFAIGVK	liver	—	100.0	MRM	—
B7ZNH7	Col14a1	ESGVELFAIGVK	lung	—	100.0	MRM	—
B8JJG7	Tfg	LLSNDEVTIK	BrainStem	—	100.0	MRM	—
B9EJA4	Clasp2	HAAVLVETIK	BrainStem	—	100.0	MRM	—
B9EJA4	Clasp2	HAAVLVETIK	Cerebellum	—	100.0	MRM	—
B9EJA4	Clasp2	HAAVLVETIK	MockWholeBrain	—	100.0	MRM	—
D3YVW2	Golim4	YLQLQQEK	kidney	—	100.0	MRM	—
D3YVW2	Golim4	YLQLQQEK	liver	—	100.0	MRM	—
D3YVW2	Golim4	YLQLQQEK	lung	—	100.0	MRM	—
D3YWI1	Aldoa	VLAAVYK	lung	—	100.0	MRM	—
D3YWR7	Qdpr	EGGLLTLAGAK	BoneMarrow	—	100.0	MRM	—
D3YWT1	Hnrnph3	STGEAFVQFASK	Cerebellum	—	100.0	MRM	—
D3YWT1	Hnrnph3	STGEAFVQFASK	Heart	—	100.0	MRM	—
D3YWT1	Hnrnph3	STGEAFVQFASK	kidney	—	100.0	MRM	—
D3YWT1	Hnrnph3	STGEAFVQFASK	liver	—	100.0	MRM	—
D3YWT1	Hnrnph3	STGEAFVQFASK	MockWholeBrain	—	100.0	MRM	—
D3YWT1	Hnrnph3	STGEAFVQFASK	SmallIntestines	—	100.0	MRM	—
D3YXZ3	Klc2	YQDAETLYK	BrainStem	—	100.0	MRM	—
D3YXZ3	Klc2	YQDAETLYK	kidney	—	100.0	MRM	—
D3YXZ3	Klc2	YQDAETLYK	lung	—	100.0	MRM	—
D3YYK8	Mapre2	LEHEYIHNFK	Heart	—	100.0	MRM	—
D3YYK8	Mapre2	LEHEYIHNFK	SmallIntestines	—	100.0	MRM	—
D3YYT1	Glyr1	TSFFLGEVGNAAK	Cerebellum	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	BrainStem	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	Cerebellum	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	Cerebrum	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	kidney	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	liver	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	lung	—	100.0	MRM	—
D3YZP9	Ccdc6	LASLQQENK	MockWholeBrain	—	100.0	MRM	—
D3Z2Z1	Clip1	FLGETDFAK	BrainStem	—	100.0	MRM	—
D3Z2Z1	Clip1	FLGETDFAK	Cerebellum	—	100.0	MRM	—
D3Z2Z1	Clip1	FLGETDFAK	Cerebrum	—	100.0	MRM	—
D3Z2Z1	Clip1	FLGETDFAK	kidney	—	100.0	MRM	—
D3Z3B8	Dlg1	QVTPDGESDEVGVIPSK	Cerebrum	—	100.0	MRM	—
D3Z3M7	Clip1	FLGETDFAK	BrainStem	—	100.0	MRM	—
D3Z4J9	Eml1	ITIATGQVAGTSK	lung	—	100.0	MRM	—
D3Z534	Kalrn	LQGFEGTLTAQGK	liver	—	100.0	MRM	—
D3Z627	Itgal	YIIGIGK	kidney	—	100.0	MRM	—
D3Z627	Itgal	YIIGIGK	liver	—	100.0	MRM	—
D3Z656	Synj1	QQNWDSLIAGDQLINQK	Heart	—	100.0	MRM	—
D3Z656	Synj1	QQNWDSLIAGDQLINQK	lung	—	100.0	MRM	—
D3Z6Q9	Bin2	FEQSASNFYQQQAEGHK	Cerebellum	—	100.0	MRM	—
D3Z6Q9	Bin2	FEQSASNFYQQQAEGHK	kidney	—	100.0	MRM	—
D3Z6Q9	Bin2	FEQSASNFYQQQAEGHK	plasma	—	100.0	MRM	—
D3Z6Z0	Snx3	QGLEQFINK	Pancreas	—	100.0	MRM	—
D3Z7Q2	Smim20	AGIVQEDVQPPGLK	Cerebrum	—	100.0	MRM	—

SysQuan Mouse Database

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