SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q3T9S7	Pcx	AYVEANQMLGDLIK	liver	—	78.3	MRM+PRM	['Meth']
Q8BHF7	Pgs1	VLSSPAEFFELMK	Spermatozoa	—	77.7	MRM+PRM	['Meth']
Q9R111	Gda	FVSEMLQK	BoneMarrow	—	78.0	MRM+PRM	['Meth']
P19157	Gstp1	MLLADQGQSWK	plasma	—	76.8	MRM+PRM	['Meth']
Q91ZA3	Pcca	EAGGNMSIQFLGTVYK	Cerebrum	—	77.3	MRM+PRM	['Meth']
Q99KK2	Cmas	HLIEMGYLQGGK	Pancreas	—	77.0	MRM+PRM	['Meth']
P46425	Gstp2	MLLADQGQSWK	Cerebellum	—	75.4	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	liver	—	72.9	MRM+PRM	['Meth']
E9QMK9	Dglucy	IPGISSTGVGDGGNELGMGK	liver	—	71.9	MRM+PRM	['Meth']
Q64737	Gart	AVQEIMQEK	Pancreas	—	72.2	MRM+PRM	['Meth']
Q99L13	Hibadh	TPVGFIGLGNMGNPMAK	kidney	—	72.5	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	Heart	—	70.9	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	SmallIntestines	—	71.4	MRM+PRM	['Meth']
Q3V117	Acly	AFDSGIIPMEFVNK	kidney	—	70.0	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	Spleen	—	67.8	MRM+PRM	['Meth']
P50516	Atp6v1a	DFPELTMEVDGK	Pancreas	—	67.2	MRM+PRM	['Meth']
Q99K67	Aass	DAGYEISLGLMPK	lung	—	67.1	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	MockWholeBrain	—	66.1	MRM+PRM	['Meth']
Q8BH95	Echs1	EGMTAFVEK	MockWholeBrain	—	64.9	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	liver	—	63.9	MRM+PRM	['Meth']
P17751	Tpi1	VTNGAFTGEISPGMIK	BrainStem	—	62.2	MRM+PRM	['Meth']
Q6P6M7	Sepsecs	MQDVDLFIK	MockWholeBrain	—	59.7	MRM+PRM	['Meth']
Q9WTP6	Ak2	LVSDEMVVELIEK	MockWholeBrain	—	60.0	MRM+PRM	['Meth']
E9QB02	Mars1	NPEQVDLYQFMAK	BrainStem	—	56.9	MRM+PRM	['Meth']
Q99L13	Hibadh	TPVGFIGLGNMGNPMAK	Spermatozoa	—	55.8	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	Spleen	—	47.9	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	MockWholeBrain	—	47.6	MRM+PRM	['Meth']
Q99K67	Aass	DAGYEISLGLMPK	kidney	—	47.0	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	Cerebellum	—	44.6	MRM+PRM	['Meth']
S4R1W1	Gapdhrt	VIISAPSADAPMFVMGVNHEK	MockWholeBrain	—	45.4	MRM+PRM	['Meth']
P01027	C3	ACEPGVDYVYK	Heart	—	40.9	MRM+PRM	['Cys']
Q8BWT1	Acaa2	QTMQVDEHARPQTTLEQLQK	MockWholeBrain	—	41.4	MRM+PRM	['Meth']
Q8CFA2	Amt	MPFVPTNYYTLK	BrainStem	—	29.8	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	SmallIntestines	—	26.4	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	liver	—	24.5	MRM+PRM	['Meth']
Q9CZS1	Aldh1b1	LAPALATGNTVVMK	MockWholeBrain	—	17.8	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	Heart	—	16.0	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	kidney	—	10.3	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	lung	—	5.8	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	BoneMarrow	—	4.1	MRM+PRM	['Meth']
Q792Y9	Prss1l	TLNNDIMLIK	BrainStem	—	3.0	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	BrainStem	—	3.0	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	TailSkin	—	2.5	MRM+PRM	['Meth']
B9EJ35	Prss3	TLNNDIMLIK	lung	—	1.3	MRM+PRM	['Meth']
Q3V2G3	Prss3	TLNNDIMLIK	Cerebrum	—	1.1	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	Cerebrum	—	1.1	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	Muscle	—	1.3	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	Spermatozoa	—	1.3	MRM+PRM	['Meth']
A0A087WSN6	Fn1	GEWTCKPIAEK	liver	—	—	MRM+PRM	['Cys']
A0A087WSN6	Fn1	GEWTCKPIAEK	Spleen	—	—	MRM+PRM	['Cys']

SysQuan Mouse Database

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