SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q99K67	Aass	DAGYEISLGLMPK	Cerebellum	—	89.1	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	Heart	—	88.7	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	Spleen	—	89.1	MRM+PRM	['Meth']
E9QB02	Mars1	NPEQVDLYQFMAK	BrainStem	—	88.5	MRM+PRM	['Meth']
P01027	C3	ACEPGVDYVYK	kidney	—	88.1	MRM+PRM	['Cys']
Q04447	Ckb	LEQGQAIDDLMPAQK	MockWholeBrain	—	88.2	MRM+PRM	['Meth']
Q8CFX1	H6pd	WEGVPFILMSGK	SmallIntestines	—	87.5	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	Cerebellum	—	88.0	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	Spermatozoa	—	88.4	MRM+PRM	['Meth']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	SmallIntestines	—	86.8	MRM+PRM	['Meth']
Q9CZS1	Aldh1b1	LAPALATGNTVVMK	kidney	—	87.0	MRM+PRM	['Meth']
Q9D1A2	Cndp2	NVMLLPVGSADDGAHSQNEK	Pancreas	—	87.4	MRM+PRM	['Meth']
Q9D7X8	Ggct	SYLMTNYESAPPSPQYK	MockWholeBrain	—	87.0	MRM+PRM	['Meth']
Q9WTP6	Ak2	LVSDEMVVELIEK	BoneMarrow	—	87.4	MRM+PRM	['Meth']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	Heart	—	85.6	MRM+PRM	['Meth']
Q3UEA1	Acly	AFDSGIIPMEFVNK	liver	—	85.9	MRM+PRM	['Meth']
Q99L13	Hibadh	TPVGFIGLGNMGNPMAK	Cerebrum	—	86.0	MRM+PRM	['Meth']
Q9D1A2	Cndp2	NVMLLPVGSADDGAHSQNEK	Muscle	—	86.1	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	Pancreas	—	86.2	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	MockWholeBrain	—	86.1	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	Pancreas	—	85.0	MRM+PRM	['Meth']
Q8BH95	Echs1	EGMTAFVEK	BrainStem	—	85.0	MRM+PRM	['Meth']
Q9DCL9	Paics	EVTPEGLQMVK	kidney	—	84.9	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	lung	—	83.9	MRM+PRM	['Meth']
Q8C0I1	Agps	ESISDVGFGMLK	BoneMarrow	—	84.2	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	Heart	—	83.8	MRM+PRM	['Meth']
Q99KK2	Cmas	HLIEMGYLQGGK	SmallIntestines	—	84.4	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	BrainStem	—	84.0	MRM+PRM	['Meth']
Q9DCL9	Paics	EVTPEGLQMVK	Pancreas	—	84.4	MRM+PRM	['Meth']
Q9ERS2	Ndufa13	ENLEEEAIIMK	Heart	—	84.0	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	Heart	—	83.5	MRM+PRM	['Meth']
P49586	Pcyt1a	EFIGSFLEMFGPEGALK	BrainStem	—	82.5	MRM+PRM	['Meth']
Q91ZA3	Pcca	EAGGNMSIQFLGTVYK	Heart	—	83.3	MRM+PRM	['Meth']
Q9CQU0	Txndc12	YFYVSAEQVVQGMK	MockWholeBrain	—	82.6	MRM+PRM	['Meth']
Q9D1A2	Cndp2	NVMLLPVGSADDGAHSQNEK	BoneMarrow	—	83.2	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	kidney	—	83.3	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	SmallIntestines	—	83.4	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	Cerebrum	—	82.3	MRM+PRM	['Meth']
P17751	Tpi1	VTNGAFTGEISPGMIK	Cerebrum	—	81.9	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	MockWholeBrain	—	82.1	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	Pancreas	—	81.9	MRM+PRM	['Meth']
P50516	Atp6v1a	DFPELTMEVDGK	BrainStem	—	81.9	MRM+PRM	['Meth']
Q64737	Gart	AVQEIMQEK	SmallIntestines	—	81.6	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	Spleen	—	82.4	MRM+PRM	['Meth']
P17751	Tpi1	VTNGAFTGEISPGMIK	MockWholeBrain	—	80.7	MRM+PRM	['Meth']
Q00612	G6pdx	GPTEADELMK	Cerebrum	—	80.9	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	SmallIntestines	—	79.6	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	Spermatozoa	—	79.2	MRM+PRM	['Meth']
Q9WUM5	Suclg1	IGIMPGHIHK	Spermatozoa	—	78.5	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	BoneMarrow	—	78.0	MRM+PRM	['Meth']

SysQuan Mouse Database

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