SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O35969	Gamt	YYAFPQMITPLVTK	Muscle	—	94.3	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	SmallIntestines	—	93.8	MRM+PRM	['Meth']
P26443	Glud1	ALASLMTYK	Cerebrum	—	94.4	MRM+PRM	['Meth']
P39655	Alox12	LVLPSGMEELQAQLEK	BoneMarrow	—	93.9	MRM+PRM	['Meth']
Q05920	Pc	AYVEANQMLGDLIK	SmallIntestines	—	94.4	MRM+PRM	['Meth']
Q07417	Acads	GISAFLVPMPTPGLTLGK	Muscle	—	94.3	MRM+PRM	['Meth']
Q3V117	Acly	AFDSGIIPMEFVNK	BoneMarrow	—	94.2	MRM+PRM	['Meth']
Q91V92	Acly	AFDSGIIPMEFVNK	BoneMarrow	—	93.5	MRM+PRM	['Meth']
Q91V92	Acly	AFDSGIIPMEFVNK	Muscle	—	93.7	MRM+PRM	['Meth']
Q9ERS2	Ndufa13	ENLEEEAIIMK	Pancreas	—	93.8	MRM+PRM	['Meth']
Q9Z2C4	Mtmr1	LAQMEEAPLFPGESIK	MockWholeBrain	—	94.3	MRM+PRM	['Meth']
P19157	Gstp1	MLLADQGQSWK	Cerebrum	—	92.8	MRM+PRM	['Meth']
Q00612	G6pdx	GPTEADELMK	Muscle	—	92.9	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	Muscle	—	92.5	MRM+PRM	['Meth']
Q64737	Gart	AVQEIMQEK	liver	—	92.8	MRM+PRM	['Meth']
Q99K67	Aass	TVGLPTAMAAK	Cerebellum	—	93.4	MRM+PRM	['Meth']
Q99L13	Hibadh	TPVGFIGLGNMGNPMAK	Muscle	—	92.6	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	SmallIntestines	—	93.4	MRM+PRM	['Meth']
Q9DCL9	Paics	EVTPEGLQMVK	lung	—	93.4	MRM+PRM	['Meth']
Q9R111	Gda	FVSEMLQK	SmallIntestines	—	93.1	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	Pancreas	—	92.6	MRM+PRM	['Meth']
P26443	Glud1	ALASLMTYK	Spermatozoa	—	92.1	MRM+PRM	['Meth']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	BrainStem	—	92.5	MRM+PRM	['Meth']
Q07417	Acads	GISAFLVPMPTPGLTLGK	BoneMarrow	—	92.0	MRM+PRM	['Meth']
Q64737	Gart	AVQEIMQEK	Cerebellum	—	92.3	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	Spermatozoa	—	92.5	MRM+PRM	['Meth']
Q91Y74	St3gal4	ILNPFFMEIAADK	SmallIntestines	—	92.4	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	Cerebrum	—	91.9	MRM+PRM	['Meth']
Q9DCL9	Paics	EVTPEGLQMVK	MockWholeBrain	—	92.5	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	MockWholeBrain	—	91.3	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	Muscle	—	90.7	MRM+PRM	['Meth']
P17751	Tpi1	VTNGAFTGEISPGMIK	Pancreas	—	91.0	MRM+PRM	['Meth']
Q64737	Gart	AVQEIMQEK	BoneMarrow	—	90.7	MRM+PRM	['Meth']
Q8BH86	Dglucy	IPGISSTGVGDGGNELGMGK	MockWholeBrain	—	91.0	MRM+PRM	['Meth']
Q9DBT5	Ampd2	NSVLMSGFSHK	BoneMarrow	—	91.0	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	BoneMarrow	—	91.2	MRM+PRM	['Meth']
Q9WUM5	Suclg1	IGIMPGHIHK	SmallIntestines	—	90.8	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	Spleen	—	89.9	MRM+PRM	['Meth']
P26443	Glud1	ALASLMTYK	MockWholeBrain	—	89.9	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	BrainStem	—	90.2	MRM+PRM	['Meth']
Q68FL6	Mars1	NPEQVDLYQFMAK	BoneMarrow	—	90.3	MRM+PRM	['Meth']
Q8BH86	Dglucy	IPGISSTGVGDGGNELGMGK	Muscle	—	90.0	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	Cerebrum	—	90.1	MRM+PRM	['Meth']
Q91YI0	Asl	EFSFVQLSDAYSTGSSLMPQK	Pancreas	—	90.0	MRM+PRM	['Meth']
Q9D2G2	Dlst	LGFMSAFVK	BrainStem	—	90.3	MRM+PRM	['Meth']
D3Z6F5	Atp5f1a	NVQAEEMVEFSSGLK	Cerebellum	—	89.5	MRM+PRM	['Meth']
E9QB02	Mars1	NPEQVDLYQFMAK	MockWholeBrain	—	89.0	MRM+PRM	['Meth']
P11276	Fn1	GEWTCKPIAEK	kidney	—	89.1	MRM+PRM	['Cys']
Q6ZPR5	Smpd4	VFAQPNLAEMIQK	Cerebrum	—	88.7	MRM+PRM	['Meth']
Q920N2	Hlcs	FMAYLSQGGK	Cerebrum	—	89.1	MRM+PRM	['Meth']

SysQuan Mouse Database

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