SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
S4R1W1	Gapdhrt	VIISAPSADAPMFVMGVNHEK	Heart	—	100.0	MRM+PRM	['Meth']
S4R1W1	Gapdhrt	VIISAPSADAPMFVMGVNHEK	kidney	—	100.0	MRM+PRM	['Meth']
S4R1W1	Gapdhrt	VIISAPSADAPMFVMGVNHEK	liver	—	100.0	MRM+PRM	['Meth']
S4R257	Gapdh	VIISAPSADAPMFVMGVNHEK	Cerebrum	—	100.0	MRM+PRM	['Meth']
S4R257	Gapdh	VIISAPSADAPMFVMGVNHEK	kidney	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	kidney	—	98.6	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	lung	—	98.6	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	SmallIntestines	—	98.7	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	Muscle	—	98.7	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	lung	—	98.6	MRM+PRM	['Meth']
P11680	Cfp	LCTPLLPK	plasma	—	98.5	MRM+PRM	['Cys']
P16460	Ass1	NDLMEYAK	kidney	—	99.0	MRM+PRM	['Meth']
P19157	Gstp1	MLLADQGQSWK	Pancreas	—	98.5	MRM+PRM	['Meth']
P26443	Glud1	ALASLMTYK	BoneMarrow	—	98.6	MRM+PRM	['Meth']
P26443	Glud1	ALASLMTYK	lung	—	98.7	MRM+PRM	['Meth']
P47856	Gfpt1	AVQTLQMELQQIMK	Pancreas	—	99.3	MRM+PRM	['Meth']
P50247	Ahcy	DGPLNMILDDGGDLTNLIHTK	Heart	—	99.1	MRM+PRM	['Meth']
P97807	Fh	LMNESLMLVTALNPHIGYDK	BoneMarrow	—	98.6	MRM+PRM	['Meth']
P97807	Fh	LMNESLMLVTALNPHIGYDK	SmallIntestines	—	98.5	MRM+PRM	['Meth']
P97807	Fh	LMNESLMLVTALNPHIGYDK	Spermatozoa	—	99.3	MRM+PRM	['Meth']
Q00612	G6pdx	GPTEADELMK	Cerebellum	—	98.9	MRM+PRM	['Meth']
Q07417	Acads	GISAFLVPMPTPGLTLGK	BrainStem	—	98.5	MRM+PRM	['Meth']
Q07417	Acads	GISAFLVPMPTPGLTLGK	lung	—	99.1	MRM+PRM	['Meth']
Q64435	Ugt1a6	LLVVPQDGSHWLSMK	lung	—	99.0	MRM+PRM	['Meth']
Q64674	Srm	LTLHVGDGFEFMK	Spleen	—	99.1	MRM+PRM	['Meth']
Q8BH86	Dglucy	IPGISSTGVGDGGNELGMGK	Pancreas	—	99.0	MRM+PRM	['Meth']
Q8BH95	Echs1	IVVAMAK	Pancreas	—	99.2	MRM+PRM	['Meth']
Q8BWT1	Acaa2	QTMQVDEHARPQTTLEQLQK	kidney	—	98.5	MRM+PRM	['Meth']
Q99KK2	Cmas	HLIEMGYLQGGK	kidney	—	99.1	MRM+PRM	['Meth']
Q99MR8	Mccc1	SFNDDAMLIEK	MockWholeBrain	—	98.8	MRM+PRM	['Meth']
Q9D1A2	Cndp2	NVMLLPVGSADDGAHSQNEK	Spleen	—	98.5	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	Cerebellum	—	98.8	MRM+PRM	['Meth']
Q9DBG1	Cyp27a1	DFAHMPLLK	lung	—	98.7	MRM+PRM	['Meth']
Q9DBP5	Cmpk1	EMDQTMAANAQK	Muscle	—	98.7	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	Spleen	—	98.7	MRM+PRM	['Meth']
Q9R111	Gda	FVSEMLQK	Cerebrum	—	98.6	MRM+PRM	['Meth']
Q9R111	Gda	FVSEMLQK	MockWholeBrain	—	98.5	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	Muscle	—	98.2	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	Spermatozoa	—	98.1	MRM+PRM	['Meth']
O35969	Gamt	YYAFPQMITPLVTK	kidney	—	98.4	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	BrainStem	—	98.4	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	Cerebrum	—	97.7	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	BoneMarrow	—	97.6	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	BrainStem	—	98.1	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	SmallIntestines	—	97.8	MRM+PRM	['Meth']
P01027	C3	ACEPGVDYVYK	lung	—	98.3	MRM+PRM	['Cys']
P01027	C3	ACEPGVDYVYK	plasma	—	97.9	MRM+PRM	['Cys']
P06801	Me1	DMAAFNERPIIFALSNPTSK	BrainStem	—	98.0	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	BoneMarrow	—	97.6	MRM+PRM	['Meth']
P11725	Otc	FGMHLQAATPK	SmallIntestines	—	98.1	MRM+PRM	['Meth']

SysQuan Mouse Database

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