SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
A0A087WRT4	Fat1	IAVTVADNASPK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	IAVTVADNASPK	Cerebrum	—	100.0	None	—
A0A087WRT4	Fat1	ILDENDNRPQFLQK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	ILDENDNRPQFLQK	MockWholeBrain	—	100.0	None	—
A0A087WRT4	Fat1	ILEVFQK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	ILEVFQK	MockWholeBrain	—	100.0	None	—
A0A087WRT4	Fat1	IVSGDSENLFK	MockWholeBrain	—	100.0	None	—
A0A087WRT4	Fat1	LDPATGALYTAEK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	LFSTVLLK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	LFSTVLLK	MockWholeBrain	—	100.0	None	—
A0A087WRT4	Fat1	LIYTLQSSIDPASLK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	LIYTLQSSIDPASLK	Cerebrum	—	100.0	None	—
A0A087WRT4	Fat1	LIYTLQSSIDPASLK	MockWholeBrain	—	100.0	None	—
A0A087WRT4	Fat1	LTGLITTK	BrainStem	—	100.0	None	—
A0A087WRT4	Fat1	LTGLITTK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	LTGLITTK	MockWholeBrain	—	100.0	None	—
A0A087WRT4	Fat1	LVLDEVHTASGTAPGALK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	LVLDEVHTASGTAPGALK	Cerebrum	—	100.0	None	—
A0A087WRT4	Fat1	LYGSSGVSSLAK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	LYGSSGVSSLAK	MockWholeBrain	—	100.0	None	—
A0A087WRT4	Fat1	SGIIQLEK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	VLGTNSNPPEFTQTSYK	BrainStem	—	100.0	None	—
A0A087WRT4	Fat1	VLGTNSNPPEFTQTSYK	Cerebellum	—	100.0	None	—
A0A087WRT4	Fat1	VLGTNSNPPEFTQTSYK	Cerebrum	—	100.0	None	—
A0A087WRT4	Fat1	VTVEDQNDNAPVFVNLPYYAVVK	Cerebellum	—	100.0	None	—
A0A087WRX8	Srrm2	QIAPEPPKPY	BrainStem	—	100.0	None	—
A0A087WS16	Col6a3	AEILNLVK	BrainStem	—	100.0	None	—
A0A087WS16	Col6a3	AEILNLVK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	AEILNLVK	Cerebrum	—	100.0	None	—
A0A087WS16	Col6a3	AEILNLVK	MockWholeBrain	—	100.0	None	—
A0A087WS16	Col6a3	DLTDFLK	BrainStem	—	100.0	None	—
A0A087WS16	Col6a3	DLTDFLK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	DLTDFLK	Cerebrum	—	100.0	None	—
A0A087WS16	Col6a3	EELSSLKPILTPSTGAGVGSK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	GPSVVLK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	IEDGVPQHLVLFLGGK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	BrainStem	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	Cerebrum	—	100.0	None	—
A0A087WS16	Col6a3	IGVVQFSNDVFPEFYLK	BrainStem	—	100.0	None	—
A0A087WS16	Col6a3	IIEELDVKPDGTR	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	IIEELDVKPDGTR	Cerebrum	—	100.0	None	—
A0A087WS16	Col6a3	LLVLITGGK	BrainStem	—	100.0	None	—
A0A087WS16	Col6a3	LLVLITGGK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	LLVLITGGK	Cerebrum	—	100.0	None	—
A0A087WS16	Col6a3	SALLDSIQNLQVALTSK	BrainStem	—	100.0	None	—
A0A087WS16	Col6a3	SDDEVDDSAVELK	BrainStem	—	100.0	None	—
A0A087WS16	Col6a3	SDDEVDDSAVELK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	SDDEVDDSAVELK	Cerebrum	—	100.0	None	—
A0A087WS16	Col6a3	SDDEVDDSAVELK	MockWholeBrain	—	100.0	None	—

SysQuan Mouse Database

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