SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9DBP5	Cmpk1	EMDQTMAANAQK	MockWholeBrain	—	100.0	MRM+PRM	['Meth']
Q9DBP5	Cmpk1	EMDQTMAANAQK	TailSkin	—	100.0	MRM+PRM	['Meth']
Q9DBT5	Ampd2	NSVLMSGFSHK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q9DBT5	Ampd2	NSVLMSGFSHK	liver	—	100.0	MRM+PRM	['Meth']
Q9DCL9	Paics	EVTPEGLQMVK	Heart	—	100.0	MRM+PRM	['Meth']
Q9DCU9	Hoga1	MSSAALIHHYTK	kidney	—	100.0	MRM+PRM	['Meth']
Q9ERS2	Ndufa13	ENLEEEAIIMK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q9ERS2	Ndufa13	ENLEEEAIIMK	lung	—	100.0	MRM+PRM	['Meth']
Q9ERS2	Ndufa13	ENLEEEAIIMK	Muscle	—	100.0	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	BrainStem	—	100.0	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	liver	—	100.0	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	lung	—	100.0	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	MockWholeBrain	—	100.0	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	Pancreas	—	100.0	MRM+PRM	['Meth']
Q9QYC7	Ggcx	MQLPAGEYHK	liver	—	100.0	MRM+PRM	['Meth']
Q9R111	Gda	FVSEMLQK	BrainStem	—	100.0	MRM+PRM	['Meth']
Q9R111	Gda	FVSEMLQK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q9R111	Gda	FVSEMLQK	Heart	—	100.0	MRM+PRM	['Meth']
Q9R111	Gda	FVSEMLQK	kidney	—	100.0	MRM+PRM	['Meth']
Q9R111	Gda	FVSEMLQK	liver	—	100.0	MRM+PRM	['Meth']
Q9R111	Gda	FVSEMLQK	lung	—	100.0	MRM+PRM	['Meth']
Q9R1J0	Nsdhl	NGTEDLPYAMKPIDYYTETK	BrainStem	—	100.0	MRM+PRM	['Meth']
Q9R1J0	Nsdhl	NGTEDLPYAMKPIDYYTETK	liver	—	100.0	MRM+PRM	['Meth']
Q9WTP6	Ak2	LVSDEMVVELIEK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q9WTP6	Ak2	LVSDEMVVELIEK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q9WTP6	Ak2	LVSDEMVVELIEK	liver	—	100.0	MRM+PRM	['Meth']
Q9WTP6	Ak2	LVSDEMVVELIEK	lung	—	100.0	MRM+PRM	['Meth']
Q9WTP6	Ak2	LVSDEMVVELIEK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
Q9WTP6	Ak2	LVSDEMVVELIEK	Spleen	—	100.0	MRM+PRM	['Meth']
Q9WTP6	Ak2	LVSDEMVVELIEK	TailSkin	—	100.0	MRM+PRM	['Meth']
Q9WUM5	Suclg1	IGIMPGHIHK	BrainStem	—	100.0	MRM+PRM	['Meth']
Q9WUM5	Suclg1	IGIMPGHIHK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q9WUM5	Suclg1	IGIMPGHIHK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q9WUM5	Suclg1	IGIMPGHIHK	kidney	—	100.0	MRM+PRM	['Meth']
Q9WUM5	Suclg1	IGIMPGHIHK	lung	—	100.0	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	BoneMarrow	—	100.0	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	liver	—	100.0	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	lung	—	100.0	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
Q9Z2C4	Mtmr1	LAQMEEAPLFPGESIK	BoneMarrow	—	100.0	MRM+PRM	['Meth']
Q9Z2C4	Mtmr1	LAQMEEAPLFPGESIK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q9Z2C4	Mtmr1	LAQMEEAPLFPGESIK	Heart	—	100.0	MRM+PRM	['Meth']
Q9Z2C4	Mtmr1	LAQMEEAPLFPGESIK	kidney	—	100.0	MRM+PRM	['Meth']
Q9Z2C4	Mtmr1	LAQMEEAPLFPGESIK	liver	—	100.0	MRM+PRM	['Meth']
Q9Z2C4	Mtmr1	LAQMEEAPLFPGESIK	lung	—	100.0	MRM+PRM	['Meth']
S4R1W1	Gapdhrt	VIISAPSADAPMFVMGVNHEK	Cerebellum	—	100.0	MRM+PRM	['Meth']

SysQuan Mouse Database

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