SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O88844	Idh1	SIEDFAHSSFQMALSK	Cerebrum	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	Heart	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	kidney	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	liver	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	lung	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	MockWholeBrain	—	100.0	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	Cerebellum	—	100.0	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	Cerebrum	—	100.0	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	Heart	—	100.0	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	MockWholeBrain	—	100.0	MRM+PRM	['Meth']
P01027	C3	ACEPGVDYVYK	BoneMarrow	—	100.0	MRM+PRM	['Cys']
P01027	C3	ACEPGVDYVYK	BrainStem	—	100.0	MRM+PRM	['Cys']
P01027	C3	ACEPGVDYVYK	Cerebellum	—	100.0	MRM+PRM	['Cys']
P01027	C3	ACEPGVDYVYK	Cerebrum	—	100.0	MRM+PRM	['Cys']
P06801	Me1	DMAAFNERPIIFALSNPTSK	Cerebellum	—	100.0	MRM+PRM	['Meth']
P06801	Me1	DMAAFNERPIIFALSNPTSK	Cerebrum	—	100.0	MRM+PRM	['Meth']
P06801	Me1	DMAAFNERPIIFALSNPTSK	kidney	—	100.0	MRM+PRM	['Meth']
P06801	Me1	DMAAFNERPIIFALSNPTSK	liver	—	100.0	MRM+PRM	['Meth']
P06801	Me1	DMAAFNERPIIFALSNPTSK	lung	—	100.0	MRM+PRM	['Meth']
P06801	Me1	DMAAFNERPIIFALSNPTSK	MockWholeBrain	—	100.0	MRM+PRM	['Meth']
P06801	Me1	DMAAFNERPIIFALSNPTSK	Muscle	—	100.0	MRM+PRM	['Meth']
P06801	Me1	DMAAFNERPIIFALSNPTSK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	BrainStem	—	100.0	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	Cerebellum	—	100.0	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	Cerebrum	—	100.0	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	lung	—	100.0	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	Muscle	—	100.0	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	plasma	—	100.0	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	plasma	—	100.0	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	Spleen	—	100.0	MRM+PRM	['Meth']
P11680	Cfp	LCTPLLPK	Heart	—	100.0	MRM+PRM	['Cys']
P11680	Cfp	LCTPLLPK	kidney	—	100.0	MRM+PRM	['Cys']
P11680	Cfp	LCTPLLPK	lung	—	100.0	MRM+PRM	['Cys']
P16015	Ca3	EPMTVSSDQMAK	BrainStem	—	100.0	MRM+PRM	['Meth']
P16015	Ca3	EPMTVSSDQMAK	kidney	—	100.0	MRM+PRM	['Meth']
P16015	Ca3	EPMTVSSDQMAK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
P16015	Ca3	EPMTVSSDQMAK	TailSkin	—	100.0	MRM+PRM	['Meth']
P16460	Ass1	NDLMEYAK	BrainStem	—	100.0	MRM+PRM	['Meth']
P16460	Ass1	NDLMEYAK	lung	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	BrainStem	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	Cerebellum	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	Cerebrum	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	liver	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	lung	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	Pancreas	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	plasma	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	Spermatozoa	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	Spleen	—	100.0	MRM+PRM	['Meth']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	TailSkin	—	100.0	MRM+PRM	['Meth']

SysQuan Mouse Database

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