SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q9JHK5	Plek	GSTLTSPCQDFGK	BrainStem	—	—	MRM	['Cys']
Q9JK38	Gnpnat1	ITLECLPQNVGFYK	MockWholeBrain	—	—	MRM	['Cys']
Q9QUJ7	Acsl4	EILSEENEMQPNGK	BrainStem	—	—	MRM	['Meth']
Q9QUJ7	Acsl4	EILSEENEMQPNGK	Cerebrum	—	—	MRM	['Meth']
Q9Z1J3	Nfs1	EMSPLWEMVQDGIDLK	BrainStem	—	—	MRM	['Meth']
Q9Z1J3	Nfs1	EMSPLWEMVQDGIDLK	Cerebellum	—	—	MRM	['Meth']
Q9Z1J3	Nfs1	EMSPLWEMVQDGIDLK	Cerebrum	—	—	MRM	['Meth']
Q9Z1J3	Nfs1	EMSPLWEMVQDGIDLK	MockWholeBrain	—	—	MRM	['Meth']
Q9Z1J3	Nfs1	IPLDVNDMK	MockWholeBrain	—	—	MRM	['Meth']
Q9Z2L6	Minpp1	FFDHCEK	Cerebellum	—	—	MRM	['Cys']
Q9Z2L6	Minpp1	FFDHCEK	MockWholeBrain	—	—	MRM	['Cys']
P05213	Tuba1b	DVNAAIATIK	BrainStem	—	100.0	PRM	—
P05214	Tuba3a	DVNAAIATIK	BrainStem	—	100.0	PRM	—
P11438	Lamp1	ALQATVGNSYK	BrainStem	—	100.0	PRM	—
P11438	Lamp1	ALQATVGNSYK	Cerebellum	—	100.0	PRM	—
P11438	Lamp1	ALQATVGNSYK	Cerebrum	—	100.0	PRM	—
P23927	Cryab	HFSPEELK	BrainStem	—	100.0	PRM	—
P23927	Cryab	HFSPEELK	Cerebrum	—	100.0	PRM	—
P23927	Cryab	HFSPEELK	MockWholeBrain	—	100.0	PRM	—
P47754	Capza2	EGAAHAFAQYNLDQFTPVK	BrainStem	—	100.0	PRM	—
P47754	Capza2	EGAAHAFAQYNLDQFTPVK	Cerebrum	—	100.0	PRM	—
P48036	Anxa5	LYDAYELK	Cerebellum	—	100.0	PRM	—
P48036	Anxa5	LYDAYELK	MockWholeBrain	—	100.0	PRM	—
P63260	Actg1	VAPEEHPVLLTEAPLNPK	BrainStem	—	100.0	PRM	—
P63260	Actg1	VAPEEHPVLLTEAPLNPK	Cerebrum	—	100.0	PRM	—
Q3UD81	Actg1	VAPEEHPVLLTEAPLNPK	Cerebrum	—	100.0	PRM	—
Q60605	Myl6	HVLVTLGEK	BrainStem	—	100.0	PRM	—
Q60605	Myl6	HVLVTLGEK	Cerebellum	—	100.0	PRM	—
Q61704	Itih3	LWAYLTIEQLLEK	BrainStem	—	100.0	PRM	—
Q642K0	Myl6	HVLVTLGEK	BrainStem	—	100.0	PRM	—
Q642K0	Myl6	HVLVTLGEK	Cerebrum	—	100.0	PRM	—
Q8CIE6	Copa	QELILSNSEDK	BrainStem	—	100.0	PRM	—
Q8CIE6	Copa	QELILSNSEDK	Cerebellum	—	100.0	PRM	—
Q9DC11	Plxdc2	EIPVLVTQISSTNHPVK	BrainStem	—	100.0	PRM	—
Q9DC11	Plxdc2	EIPVLVTQISSTNHPVK	Cerebrum	—	100.0	PRM	—
Q9ES46	Parvb	QLEEDLYDGQVLQK	BrainStem	—	100.0	PRM	—
Q9ES46	Parvb	QLEEDLYDGQVLQK	Cerebellum	—	100.0	PRM	—
Q9ES46	Parvb	QLEEDLYDGQVLQK	MockWholeBrain	—	100.0	PRM	—
Q9JKR6	Hyou1	LPATEKPVLLSK	BrainStem	—	100.0	PRM	—
Q9JKR6	Hyou1	LPATEKPVLLSK	Cerebellum	—	100.0	PRM	—
Q9JKR6	Hyou1	LPATEKPVLLSK	Cerebrum	—	100.0	PRM	—
Q9JKR6	Hyou1	LPATEKPVLLSK	MockWholeBrain	—	100.0	PRM	—
Q9WVJ3	Cpq	AIINLAVYGK	BrainStem	—	100.0	PRM	—
Q9WVJ3	Cpq	AIINLAVYGK	Cerebellum	—	100.0	PRM	—
Q9WVJ3	Cpq	AIINLAVYGK	Cerebrum	—	100.0	PRM	—
Q9WVJ3	Cpq	AIINLAVYGK	MockWholeBrain	—	100.0	PRM	—
P47754	Capza2	EGAAHAFAQYNLDQFTPVK	Cerebellum	—	99.0	PRM	—
P05214	Tuba3a	DVNAAIATIK	MockWholeBrain	—	99.0	PRM	—
P84084	Arf5	DAVLLVFANK	MockWholeBrain	—	98.3	PRM	—
P48036	Anxa5	LYDAYELK	Cerebrum	—	98.2	PRM	—

SysQuan Mouse Database

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