SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
E9QB02	Mars1	NPEQVDLYQFMAK	liver	—	100.0	MRM+PRM	['Meth']
F6ZFT1	Ndufab1	LSVNSHFMK	BrainStem	—	100.0	MRM+PRM	['Meth']
F6ZFT1	Ndufab1	LSVNSHFMK	Cerebrum	—	100.0	MRM+PRM	['Meth']
F6ZFT1	Ndufab1	LSVNSHFMK	kidney	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	BoneMarrow	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	BrainStem	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	Cerebellum	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	Cerebrum	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	Heart	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	kidney	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	liver	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	lung	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	MockWholeBrain	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	Muscle	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	Pancreas	—	100.0	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	BoneMarrow	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	BrainStem	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	Cerebellum	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	Cerebrum	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	Heart	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	kidney	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	liver	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	lung	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	Pancreas	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	Spleen	—	100.0	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	TailSkin	—	100.0	MRM+PRM	['Meth']
O35490	Bhmt	AGSNVMQTFTFYASEDK	liver	—	100.0	MRM+PRM	['Meth']
O35969	Gamt	YYAFPQMITPLVTK	BrainStem	—	100.0	MRM+PRM	['Meth']
O35969	Gamt	YYAFPQMITPLVTK	Cerebellum	—	100.0	MRM+PRM	['Meth']
O35969	Gamt	YYAFPQMITPLVTK	Cerebrum	—	100.0	MRM+PRM	['Meth']
O35969	Gamt	YYAFPQMITPLVTK	Heart	—	100.0	MRM+PRM	['Meth']
O35969	Gamt	YYAFPQMITPLVTK	liver	—	100.0	MRM+PRM	['Meth']
O35969	Gamt	YYAFPQMITPLVTK	lung	—	100.0	MRM+PRM	['Meth']
O35969	Gamt	YYAFPQMITPLVTK	MockWholeBrain	—	100.0	MRM+PRM	['Meth']
O35969	Gamt	YYAFPQMITPLVTK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	kidney	—	100.0	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	MockWholeBrain	—	100.0	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	BrainStem	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	Cerebrum	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	Heart	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	kidney	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	liver	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	liver	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	lung	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	Spermatozoa	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	Spleen	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	Cerebellum	—	100.0	MRM+PRM	['Meth']

SysQuan Mouse Database

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