SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q80YX1	Tnc	ACGCAAAPDVK	Cerebrum	—	—	MRM	['Cys']
Q8BH43	Wasf2	MGQEFVESK	BrainStem	—	—	MRM	['Meth']
Q8BH43	Wasf2	MGQEFVESK	Cerebellum	—	—	MRM	['Meth']
Q8BML9	Qars1	NEVDMQVLHLLGPK	BrainStem	—	—	MRM	['Meth']
Q8BML9	Qars1	NEVDMQVLHLLGPK	MockWholeBrain	—	—	MRM	['Meth']
Q8BMS1	Hadha	VIGMHYFSPVDK	Cerebrum	—	—	MRM	['Meth']
Q8BMS1	Hadha	VIGMHYFSPVDK	MockWholeBrain	—	—	MRM	['Meth']
Q8BPB5	Efemp1	DIDECDIVPDACK	BrainStem	—	—	MRM	['Cys']
Q8BPB5	Efemp1	DIDECDIVPDACK	Cerebellum	—	—	MRM	['Cys']
Q8BTM8	Flna	EEPCLLK	MockWholeBrain	—	—	MRM	['Cys']
Q8BVI4	Qdpr	GAVHQLCQSLAGK	Cerebellum	—	—	MRM	['Cys']
Q8BWF0	Aldh5a1	VAEQLEVGMVGVNEGLISSVECPFGGVK	Cerebrum	—	—	MRM	['Meth', 'Cys']
Q8C196	Cps1	TVLMNPNIASVQTNEVGLK	Cerebellum	—	—	MRM	['Meth']
Q8CIF4	Btd	ILSGDPYCEK	BrainStem	—	—	MRM	['Cys']
Q8CIF4	Btd	ILSGDPYCEK	Cerebrum	—	—	MRM	['Cys']
Q8JZR0	Acsl5	AEYLGSCLLHK	Cerebellum	—	—	MRM	['Cys']
Q8K021	Scamp1	AQQEFATGVMSNK	Cerebrum	—	—	MRM	['Meth']
Q8K0E8	Fgb	HGTDDGVVWMNWK	BrainStem	—	—	MRM	['Meth']
Q8K0E8	Fgb	MGPTELLIEMEDWK	Cerebrum	—	—	MRM	['Meth']
Q8K0E8	Fgb	MGPTELLIEMEDWK	MockWholeBrain	—	—	MRM	['Meth']
Q8R0X7	Sgpl1	ESVTQIMK	MockWholeBrain	—	—	MRM	['Meth']
Q8R0Y6	Aldh1l1	AVQMGMSSVFFNK	BrainStem	—	—	MRM	['Meth']
Q8R0Y6	Aldh1l1	AVQMGMSSVFFNK	Cerebrum	—	—	MRM	['Meth']
Q8R0Y6	Aldh1l1	AVQMGMSSVFFNK	MockWholeBrain	—	—	MRM	['Meth']
Q8VCH6	Dhcr24	LYEQHHVVQDMLVPMK	BrainStem	—	—	MRM	['Meth']
Q8VCH6	Dhcr24	LYEQHHVVQDMLVPMK	MockWholeBrain	—	—	MRM	['Meth']
Q91WT9	Cbs	CIIVMPEK	BrainStem	—	—	MRM	['Meth', 'Cys']
Q922D8	Mthfd1	GDILVVATGQPEMVK	BrainStem	—	—	MRM	['Meth']
Q922D8	Mthfd1	GDILVVATGQPEMVK	Cerebrum	—	—	MRM	['Meth']
Q922D8	Mthfd1	GDILVVATGQPEMVK	MockWholeBrain	—	—	MRM	['Meth']
Q922D8	Mthfd1	QGFGNLPICMAK	BrainStem	—	—	MRM	['Meth', 'Cys']
Q924Y0	Bbox1	EFVDLMNSK	Cerebellum	—	—	MRM	['Meth']
Q99JY0	Hadhb	AGLTMNDIDAFEFHEAFSGQILANFK	Cerebellum	—	—	MRM	['Meth']
Q99JY0	Hadhb	AGLTMNDIDAFEFHEAFSGQILANFK	Cerebrum	—	—	MRM	['Meth']
Q99JY0	Hadhb	AGLTMNDIDAFEFHEAFSGQILANFK	MockWholeBrain	—	—	MRM	['Meth']
Q99JY0	Hadhb	ALAMGYKPK	Cerebrum	—	—	MRM	['Meth']
Q99LB7	Sardh	STVCGPESFTPDHKPLMGEAPELR	Cerebellum	—	—	MRM	['Meth', 'Cys']
Q99LB7	Sardh	STVCGPESFTPDHKPLMGEAPELR	Cerebrum	—	—	MRM	['Meth', 'Cys']
Q99LB7	Sardh	STVCGPESFTPDHKPLMGEAPELR	MockWholeBrain	—	—	MRM	['Meth', 'Cys']
Q99MR8	Mccc1	IGYPVMIK	Cerebrum	—	—	MRM	['Meth']
Q99PH4	Aldh3a2	IVMEAAAK	Cerebellum	—	—	MRM	['Meth']
Q99PH4	Aldh3a2	IVMEAAAK	MockWholeBrain	—	—	MRM	['Meth']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	Cerebrum	—	—	MRM	['Meth', 'Cys']
Q9CQA3	Sdhb	IYPLPHMYVIK	MockWholeBrain	—	—	MRM	['Meth']
Q9CQU0	Txndc12	EAAASGLPLMVIIHK	Cerebrum	—	—	MRM	['Meth']
Q9CZN7	Shmt2	ISATSIFFESMPYK	Cerebellum	—	—	MRM	['Meth']
Q9D826	Pipox	ILYELSMK	BrainStem	—	—	MRM	['Meth']
Q9EQF5	Dpys	MSVIWEK	BrainStem	—	—	MRM	['Meth']
Q9EQF5	Dpys	MSVIWEK	Cerebrum	—	—	MRM	['Meth']
Q9ET01	Pygl	INPSSMFDVHVK	MockWholeBrain	—	—	MRM	['Meth']

SysQuan Mouse Database

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