SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P24270	Cat	HMNGYGSHTFK	BrainStem	—	—	MRM	['Meth']
P24270	Cat	HMNGYGSHTFK	Cerebellum	—	—	MRM	['Meth']
P24270	Cat	HMNGYGSHTFK	Cerebrum	—	—	MRM	['Meth']
P24270	Cat	HMNGYGSHTFK	MockWholeBrain	—	—	MRM	['Meth']
P28653	Bgn	VVQCSDLGLK	Cerebellum	—	—	MRM	['Cys']
P29699	Ahsg	CNLLAEK	BrainStem	—	—	MRM	['Cys']
P29699	Ahsg	CNLLAEK	Cerebellum	—	—	MRM	['Cys']
P29699	Ahsg	CNLLAEK	Cerebrum	—	—	MRM	['Cys']
P29699	Ahsg	CNLLAEK	MockWholeBrain	—	—	MRM	['Cys']
P32020	Scp2	VFVVGVGMTK	Cerebellum	—	—	MRM	['Meth']
P32020	Scp2	VFVVGVGMTK	Cerebrum	—	—	MRM	['Meth']
P32020	Scp2	VFVVGVGMTK	MockWholeBrain	—	—	MRM	['Meth']
P32848	Pvalb	FFQMVGLK	Cerebellum	—	—	MRM	['Meth']
P35441	Thbs1	LCNNPTPQFGGK	Cerebrum	—	—	MRM	['Cys']
P46412	Gpx3	LFWEPMK	BrainStem	—	—	MRM	['Meth']
P46412	Gpx3	LFWEPMK	Cerebrum	—	—	MRM	['Meth']
P46412	Gpx3	LFWEPMK	MockWholeBrain	—	—	MRM	['Meth']
P47740	Aldh3a2	IVMEAAAK	BrainStem	—	—	MRM	['Meth']
P50431	Shmt1	IMGLDLPDGGHLTHGFMTDK	Cerebrum	—	—	MRM	['Meth']
P50431	Shmt1	IMGLDLPDGGHLTHGFMTDK	Cerebrum	—	—	MRM	['Meth']
P50544	Acadvl	LFVALQGCMDK	Cerebellum	—	—	MRM	['Meth', 'Cys']
P53395	Dbt	AASLGLLQFPILNASVDENCQNITYK	Cerebellum	—	—	MRM	['Cys']
P53395	Dbt	AASLGLLQFPILNASVDENCQNITYK	Cerebrum	—	—	MRM	['Cys']
P53395	Dbt	LAMENNIK	MockWholeBrain	—	—	MRM	['Meth']
P53395	Dbt	SYLENPAFMLLDLK	Cerebrum	—	—	MRM	['Meth']
P58252	Eef2	DLEEDHACIPIK	BrainStem	—	—	MRM	['Cys']
P58252	Eef2	DLEEDHACIPIK	Cerebellum	—	—	MRM	['Cys']
P60521	Gabarapl2	TVPQSSLTMGQLYEK	Cerebrum	—	—	MRM	['Meth']
P82198	Tgfbi	STVISYECCPGYEK	Cerebrum	—	—	MRM	['Cys']
P82198	Tgfbi	STVISYECCPGYEK	MockWholeBrain	—	—	MRM	['Cys']
P97298	Serpinf1	VPMMSDPK	BrainStem	—	—	MRM	['Meth']
P98064	Masp1	DQVLVSCDTGYK	BrainStem	—	—	MRM	['Cys']
P98064	Masp1	DQVLVSCDTGYK	MockWholeBrain	—	—	MRM	['Cys']
Q01279	Egfr	NLCYANTINWK	MockWholeBrain	—	—	MRM	['Cys']
Q01279	Egfr	YSFGATCVK	BrainStem	—	—	MRM	['Cys']
Q3TEN9	Gk	SSSEIYGLMK	Cerebrum	—	—	MRM	['Meth']
Q3TR40	Thbs1	LCNNPTPQFGGK	BrainStem	—	—	MRM	['Cys']
Q3U548	Ugp2	TYNTDVPLVLMNSFNTDEDTK	Cerebellum	—	—	MRM	['Meth']
Q61207	Psap	GCSFLPDPYQK	Cerebellum	—	—	MRM	['Cys']
Q61207	Psap	GCSFLPDPYQK	Cerebrum	—	—	MRM	['Cys']
Q61646	Hp	VMPICLPSK	MockWholeBrain	—	—	MRM	['Meth', 'Cys']
Q61830	Mrc1	WENLECVQK	BrainStem	—	—	MRM	['Cys']
Q61937	Npm1	DELHIVEAEAMNYEGSPIK	Cerebellum	—	—	MRM	['Meth']
Q64133	Maoa	LPMGAVIK	BrainStem	—	—	MRM	['Meth']
Q64133	Maoa	LPMGAVIK	Cerebrum	—	—	MRM	['Meth']
Q64727	Vcl	EILGTCK	MockWholeBrain	—	—	MRM	['Cys']
Q6PF93	Pik3c3	MNLSDVELIPLPLEPQVK	Cerebrum	—	—	MRM	['Meth']
Q6PF93	Pik3c3	MNLSDVELIPLPLEPQVK	MockWholeBrain	—	—	MRM	['Meth']
Q711T7	Nadsyn1	YDCSSADINPIGGISK	Cerebrum	—	—	MRM	['Cys']
Q711T7	Nadsyn1	YDCSSADINPIGGISK	MockWholeBrain	—	—	MRM	['Cys']

SysQuan Mouse Database

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