SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P05064	Aldoa	ALANSLACQGK	Cerebellum	—	92.4	MRM	['Cys']
Q68FL4	Ahcyl2	LCVPAMNVNDSVTK	Cerebellum	—	92.3	MRM	['Meth', 'Cys']
P55264	Adk	AATFFGCIGIDK	MockWholeBrain	—	92.3	MRM	['Cys']
P07310	Ckm	FCVGLQK	MockWholeBrain	—	92.3	MRM	['Cys']
Q8BW75	Maob	ICELYAK	Cerebrum	—	92.2	MRM	['Cys']
Q60931	Vdac3	CNTPTYCDLGK	Cerebellum	—	92.1	MRM	['Cys']
Q711T7	Nadsyn1	YDCSSADINPIGGISK	Cerebellum	—	92.1	MRM	['Cys']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	Cerebellum	—	92.0	MRM	['Cys']
P70404	Idh3g	HTVTMIPGDGIGPELMLHVK	MockWholeBrain	—	91.9	MRM	['Meth']
P61922	Abat	GVVLGGCGDK	Cerebrum	—	91.8	MRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	Cerebellum	—	91.7	MRM	['Cys']
B2RSH2	Gnai1	LFDSICNNK	Cerebellum	—	91.7	MRM	['Cys']
Q91ZA3	Pcca	VDSGIQPGSDISIYYDPMISK	Cerebrum	—	91.7	MRM	['Meth']
P07724	Alb	NECFLQHK	MockWholeBrain	—	91.6	MRM	['Cys']
P09411	Pgk1	VDFNVPMK	MockWholeBrain	—	91.5	MRM	['Meth']
Q9CQA3	Sdhb	CGPMVLDALIK	Cerebrum	—	91.5	MRM	['Meth', 'Cys']
Q91VA7	Idh3b	DMGGYSTTTDFIK	Cerebellum	—	91.3	MRM	['Meth']
Q8C5H8	Nadk2	SSGLNLCTGTGSK	MockWholeBrain	—	91.2	MRM	['Cys']
P68372	Tubb4b	EIVHLQAGQCGNQIGAK	Cerebellum	—	91.2	MRM	['Cys']
Q91WT9	Cbs	CIIVMPEK	MockWholeBrain	—	91.2	MRM	['Meth', 'Cys']
P97807	Fh	SGLGELILPENEPGSSIMPGK	Cerebellum	—	91.0	MRM	['Meth']
Q91WT9	Cbs	CIIVMPEK	Cerebrum	—	91.0	MRM	['Meth', 'Cys']
Q9WUM4	Coro1c	NGSLICTASK	MockWholeBrain	—	91.0	MRM	['Cys']
Q9DCJ9	Npl	TNQMLEAFEQK	Cerebellum	—	90.9	MRM	['Meth']
Q01853	Vcp	AIANECQANFISIK	MockWholeBrain	—	90.8	MRM	['Cys']
Q68FL4	Ahcyl2	LCVPAMNVNDSVTK	BrainStem	—	90.7	MRM	['Meth', 'Cys']
Q99JY9	Actr3	LPACVVDCGTGYTK	BrainStem	—	90.6	MRM	['Cys']
Q9DCJ9	Npl	TNQMLEAFEQK	Cerebrum	—	90.6	MRM	['Meth']
O55143	Atp2a2	SLPSVETLGCTSVICSDK	Cerebellum	—	90.6	MRM	['Cys']
P50544	Acadvl	LFVALQGCMDK	Cerebrum	—	90.6	MRM	['Meth', 'Cys']
Q01853	Vcp	LGDVISIQPCPDVK	Cerebellum	—	90.6	MRM	['Cys']
P68373	Tuba1c	TIQFVDWCPTGFK	Cerebrum	—	90.6	MRM	['Cys']
Q3V117	Acly	VDATADYICK	Cerebrum	—	90.5	MRM	['Cys']
Q60790	Rasa3	ALYIQANNCVEAK	Cerebrum	—	90.4	MRM	['Cys']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	MockWholeBrain	—	90.4	MRM	['Meth', 'Cys']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	Cerebrum	—	90.3	MRM	['Meth']
Q3V117	Acly	VDATADYICK	MockWholeBrain	—	90.2	MRM	['Cys']
B2RSH2	Gnai1	EIYTHFTCATDTK	Cerebellum	—	89.9	MRM	['Cys']
P46978	Stt3a	EGSPVLLNCLMYK	MockWholeBrain	—	89.7	MRM	['Meth', 'Cys']
P26039	Tln1	QELAVFCSPEPPAK	Cerebellum	—	89.5	MRM	['Cys']
Q91ZA3	Pcca	VDSGIQPGSDISIYYDPMISK	MockWholeBrain	—	89.5	MRM	['Meth']
P19096	Fasn	DIMLATGK	MockWholeBrain	—	89.4	MRM	['Meth']
P17182	Eno1	LMIEMDGTENK	BrainStem	—	89.3	MRM	['Meth']
P05063	Aldoc	GILAADESVGSMAK	MockWholeBrain	—	89.2	MRM	['Meth']
Q99LD8	Ddah2	LSDVTLVPVSCSELEK	MockWholeBrain	—	88.7	MRM	['Cys']
Q922D8	Mthfd1	GDILVVATGQPEMVK	Cerebellum	—	88.6	MRM	['Meth']
P63101	Ywhaz	DICNDVLSLLEK	Cerebellum	—	88.4	MRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	BrainStem	—	88.3	MRM	['Cys']
Q922D8	Mthfd1	QGFGNLPICMAK	BrainStem	—	88.3	MRM	['Meth', 'Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	MockWholeBrain	—	88.2	MRM	['Cys']

SysQuan Mouse Database

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