SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P07214	Sparc	LHLDYIGPCK	BrainStem	—	96.3	MRM	['Cys']
P28474	Adh5	AGDTVIPLYIPQCGECK	Cerebrum	—	96.3	MRM	['Cys']
Q8CI94	Pygb	TCFETFPDK	Cerebrum	—	96.3	MRM	['Cys']
P05202	Got2	EYLPIGGLAEFCK	BrainStem	—	96.2	MRM	['Cys']
P56480	Atp5f1b	FLSQPFQVAEVFTGHMGK	Cerebrum	—	96.2	MRM	['Meth']
P62880	Gnb2	TFVSGACDASIK	BrainStem	—	96.2	MRM	['Cys']
Q04447	Ckb	LGFSEVELVQMVVDGVK	BrainStem	—	96.2	MRM	['Meth']
P07356	Anxa2	STVHEILCK	Cerebrum	—	96.2	MRM	['Cys']
Q8VCT3	Rnpep	VGEGPGVCWLAPEQTAGK	MockWholeBrain	—	96.2	MRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	MockWholeBrain	—	96.2	MRM	['Cys']
Q5SV64	Myh10	EDQSILCTGESGAGK	Cerebrum	—	96.2	MRM	['Cys']
Q8VDD5	Myh9	EDQSILCTGESGAGK	Cerebrum	—	96.2	MRM	['Cys']
P47791	Gsr	LGGTCVNVGCVPK	Cerebrum	—	96.2	MRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	MockWholeBrain	—	96.1	MRM	['Cys']
Q64133	Maoa	LPMGAVIK	Cerebrum	—	96.1	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	Cerebrum	—	96.1	MRM	['Meth']
Q62261	Sptbn1	FLQDCQELSLWINEK	MockWholeBrain	—	96.0	MRM	['Cys']
Q8VDD5	Myh9	EDQSILCTGESGAGK	MockWholeBrain	—	95.9	MRM	['Cys']
A0A7P0A156	Nadk2	SSGLNLCTGTGSK	Cerebellum	—	95.9	MRM	['Cys']
P26039	Tln1	QELAVFCSPEPPAK	BrainStem	—	95.9	MRM	['Cys']
P38060	Hmgcl	GYVSCALGCPYEGK	Cerebellum	—	95.9	MRM	['Cys']
Q80SW1	Ahcyl1	LCVPAMNVNDSVTK	BrainStem	—	95.9	MRM	['Meth', 'Cys']
Q99LB2	Dhrs4	VNCLAPGLIK	MockWholeBrain	—	95.8	MRM	['Cys']
P38060	Hmgcl	GYVSCALGCPYEGK	BrainStem	—	95.8	MRM	['Cys']
P35235	Ptpn11	GVDCDIDVPK	MockWholeBrain	—	95.8	MRM	['Cys']
Q9QUM9	Psma6	DCAVIVTQK	Cerebellum	—	95.7	MRM	['Cys']
Q91ZA3	Pcca	VDSGIQPGSDISIYYDPMISK	Cerebellum	—	95.7	MRM	['Meth']
A0AAQ4VMQ7	Pcbp2	LVVPASQCGSLIGK	Cerebellum	—	95.7	MRM	['Cys']
P05480	Src	AANILVGENLVCK	BrainStem	—	95.7	MRM	['Cys']
Q8VCT3	Rnpep	VGEGPGVCWLAPEQTAGK	Cerebrum	—	95.7	MRM	['Cys']
P05063	Aldoc	GILAADESVGSMAK	Cerebellum	—	95.7	MRM	['Meth']
Q5SWU9	Acaca	FVVMVTPEDLK	BrainStem	—	95.6	MRM	['Meth']
P60335	Pcbp1	AITIAGVPQSVTECVK	Cerebellum	—	95.6	MRM	['Cys']
O55143	Atp2a2	VGEATETALTCLVEK	Cerebellum	—	95.6	MRM	['Cys']
Q99JI6	Rap1b	QWNNCAFLESSAK	MockWholeBrain	—	95.5	MRM	['Cys']
P38060	Hmgcl	GYVSCALGCPYEGK	MockWholeBrain	—	95.5	MRM	['Cys']
Q9Z2C5	Mtm1	GENSYGLDITCK	BrainStem	—	95.5	MRM	['Cys']
P80313	Cct7	QLCDNAGFDATNILNK	Cerebrum	—	95.5	MRM	['Cys']
Q64516	Gk	SSSEIYGLMK	Cerebellum	—	95.5	MRM	['Meth']
Q9R1P1	Psmb3	FGIQAQMVTTDFQK	Cerebellum	—	95.4	MRM	['Meth']
Q9QUM9	Psma6	DCAVIVTQK	Cerebrum	—	95.4	MRM	['Cys']
Q8VDD5	Myh9	IIGLDQVAGMSETALPGAFK	BrainStem	—	95.4	MRM	['Meth']
Q91WK5	Gcsh	SCYEDGWLIK	BrainStem	—	95.4	MRM	['Cys']
Q8BKZ9	Pdhx	STVPHAYATADCDLGAVLK	MockWholeBrain	—	95.3	MRM	['Cys']
P08249	Mdh2	GYLGPEQLPDCLK	Cerebrum	—	95.3	MRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	BrainStem	—	95.3	MRM	['Cys']
P60766	Cdc42	CVVVGDGAVGK	BrainStem	—	95.2	MRM	['Cys']
P63001	Rac1	CVVVGDGAVGK	BrainStem	—	95.2	MRM	['Cys']
P24527	Lta4h	AILPCQDTPSVK	MockWholeBrain	—	95.0	MRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	Cerebellum	—	95.0	MRM	['Cys']

SysQuan Mouse Database

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