SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q91ZA3	Pcca	EIGYPVMIK	MockWholeBrain	—	96.9	MRM	['Meth']
P07356	Anxa2	STVHEILCK	Cerebellum	—	96.9	MRM	['Cys']
Q8R5C5	Actr1b	ACYLSINPQK	Cerebellum	—	96.9	MRM	['Cys']
P48193	Epb41	VSLLDDTVYECVVEK	BrainStem	—	96.9	MRM	['Cys']
P61082	Ube2m	LVICPDEGFYK	Cerebellum	—	96.9	MRM	['Cys']
Q7TPR4	Actn1	ICDQWDNLGALTQK	Cerebellum	—	96.9	MRM	['Cys']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	BrainStem	—	96.9	MRM	['Meth']
P60766	Cdc42	YVECSALTQK	Cerebellum	—	96.9	MRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	Cerebellum	—	96.9	MRM	['Cys']
Q922D8	Mthfd1	QGFGNLPICMAK	Cerebrum	—	96.9	MRM	['Meth', 'Cys']
P62334	Psmc6	AVASQLDCNFLK	Cerebellum	—	96.9	MRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	MockWholeBrain	—	96.9	MRM	['Cys']
Q99LC5	Etfa	LGGEVSCLVAGTK	Cerebrum	—	96.9	MRM	['Cys']
Q8BTM8	Flna	VTYCPTEPGNYIINIK	MockWholeBrain	—	96.8	MRM	['Cys']
Q3V117	Acly	VDATADYICK	BrainStem	—	96.8	MRM	['Cys']
Q60790	Rasa3	ALYIQANNCVEAK	Cerebellum	—	96.8	MRM	['Cys']
Q922D8	Mthfd1	QGFGNLPICMAK	MockWholeBrain	—	96.8	MRM	['Meth', 'Cys']
P51881	Slc25a5	GLGDCLVK	Cerebrum	—	96.7	MRM	['Cys']
A2A839	Epb41	VSLLDDTVYECVVEK	BrainStem	—	96.7	MRM	['Cys']
P99029	Prdx5	GVLFGVPGAFTPGCSK	MockWholeBrain	—	96.7	MRM	['Cys']
P05202	Got2	IPEQSVLLLHACAHNPTGVDPRPEQWK	Cerebellum	—	96.7	MRM	['Cys']
Q3TEN9	Gk	SSSEIYGLMK	MockWholeBrain	—	96.7	MRM	['Meth']
Q64133	Maoa	LPMGAVIK	MockWholeBrain	—	96.7	MRM	['Meth']
P60766	Cdc42	CVVVGDGAVGK	Cerebellum	—	96.7	MRM	['Cys']
Q8K021	Scamp1	AQQEFATGVMSNK	BrainStem	—	96.7	MRM	['Meth']
P26039	Tln1	ASAGPQPLLVQSCK	Cerebellum	—	96.7	MRM	['Cys']
Q80XN0	Bdh1	GFLVFAGCLMK	Cerebellum	—	96.7	MRM	['Meth', 'Cys']
P55264	Adk	AATFFGCIGIDK	BrainStem	—	96.6	MRM	['Cys']
Q99JY9	Actr3	YSYVCPDLVK	Cerebellum	—	96.6	MRM	['Cys']
O88958	Gnpda1	TVFVCDEDATLELK	BrainStem	—	96.6	MRM	['Cys']
Q8BVY8	Cct8	QITSYGETCPGLEQYAIK	MockWholeBrain	—	96.6	MRM	['Cys']
Q80SW1	Ahcyl1	QVDVVITCTGNK	MockWholeBrain	—	96.6	MRM	['Cys']
Q9Z0N1	Eif2s3x	IVLTNPVCTEVGEK	BrainStem	—	96.5	MRM	['Cys']
Q9DCL9	Paics	ITSCIFQLLQEAGIK	Cerebrum	—	96.5	MRM	['Cys']
Q61207	Psap	GCSFLPDPYQK	BrainStem	—	96.5	MRM	['Cys']
P97807	Fh	SGLGELILPENEPGSSIMPGK	MockWholeBrain	—	96.5	MRM	['Meth']
P62334	Psmc6	AVASQLDCNFLK	MockWholeBrain	—	96.5	MRM	['Cys']
Q9JJZ2	Tuba8	TIQFVDWCPTGFK	MockWholeBrain	—	96.4	MRM	['Cys']
Q5SV64	Myh10	EDQSILCTGESGAGK	Cerebellum	—	96.4	MRM	['Cys']
Q8VDD5	Myh9	EDQSILCTGESGAGK	Cerebellum	—	96.4	MRM	['Cys']
Q7TPR4	Actn1	ICDQWDNLGALTQK	BrainStem	—	96.4	MRM	['Cys']
P07214	Sparc	LHLDYIGPCK	Cerebellum	—	96.4	MRM	['Cys']
Q9CV53	Gcsh	SCYEDGWLIK	MockWholeBrain	—	96.4	MRM	['Cys']
Q8R0Y6	Aldh1l1	YFAGWCDK	MockWholeBrain	—	96.4	MRM	['Cys']
P53994	Rab2a	SCLLLQFTDK	MockWholeBrain	—	96.4	MRM	['Cys']
P26039	Tln1	QELAVFCSPEPPAK	Cerebrum	—	96.3	MRM	['Cys']
P17183	Eno2	SGETEDTFIADLVVGLCTGQIK	MockWholeBrain	—	96.3	MRM	['Cys']
P28653	Bgn	VVQCSDLGLK	BrainStem	—	96.3	MRM	['Cys']
Q9R1P1	Psmb3	FGIQAQMVTTDFQK	Cerebrum	—	96.3	MRM	['Meth']
Q9Z1J3	Nfs1	IPLDVNDMK	BrainStem	—	96.3	MRM	['Meth']

SysQuan Mouse Database

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