SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P17182	Eno1	SGETEDTFIADLVVGLCTGQIK	BrainStem	—	97.4	MRM	['Cys']
P17183	Eno2	SGETEDTFIADLVVGLCTGQIK	BrainStem	—	97.4	MRM	['Cys']
P57780	Actn4	MVSDINNGWQHLEQAEK	Cerebrum	—	97.4	MRM	['Meth']
Q8CGC7	Eprs1	AYVDDTPAEQMK	MockWholeBrain	—	97.4	MRM	['Meth']
P24527	Lta4h	AILPCQDTPSVK	Cerebellum	—	97.4	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	MockWholeBrain	—	97.3	MRM	['Cys']
Q6TEK5	Vkorc1l1	ALCDLGPWVK	MockWholeBrain	—	97.3	MRM	['Cys']
Q9CQA3	Sdhb	CGPMVLDALIK	Cerebellum	—	97.3	MRM	['Meth', 'Cys']
Q99JW4	Lims1	GELYCLPCHDK	Cerebrum	—	97.3	MRM	['Cys']
E9Q1G8	Septin7	ADTLTPEECQQFK	Cerebrum	—	97.3	MRM	['Cys']
Q99MR8	Mccc1	IGYPVMIK	Cerebellum	—	97.3	MRM	['Meth']
Q99LD8	Ddah2	LSDVTLVPVSCSELEK	BrainStem	—	97.3	MRM	['Cys']
P32848	Pvalb	FFQMVGLK	BrainStem	—	97.3	MRM	['Meth']
P26039	Tln1	QVAASTAQLLVACK	Cerebrum	—	97.3	MRM	['Cys']
Q01279	Egfr	YSFGATCVK	Cerebrum	—	97.2	MRM	['Cys']
P13707	Gpd1	VCIVGSGNWGSAIAK	Cerebrum	—	97.2	MRM	['Cys']
Q99JY9	Actr3	YSYVCPDLVK	MockWholeBrain	—	97.2	MRM	['Cys']
P68368	Tuba4a	SIQFVDWCPTGFK	BrainStem	—	97.2	MRM	['Cys']
P26443	Glud1	IIKPCNHVLSLSFPIR	Cerebellum	—	97.2	MRM	['Cys']
Q8K021	Scamp1	AQQEFATGVMSNK	Cerebellum	—	97.2	MRM	['Meth']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	MockWholeBrain	—	97.2	MRM	['Meth', 'Cys']
Q01853	Vcp	LGDVISIQPCPDVK	Cerebrum	—	97.2	MRM	['Cys']
Q8BWG8	Arrb1	ACGVDYEVK	MockWholeBrain	—	97.2	MRM	['Cys']
P40124	Cap1	CVNTTLQIK	Cerebellum	—	97.2	MRM	['Cys']
P24527	Lta4h	AILPCQDTPSVK	BrainStem	—	97.2	MRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	BrainStem	—	97.2	MRM	['Cys']
P63323	Rps12	LVEALCAEHQINLIK	BrainStem	—	97.2	MRM	['Cys']
P68510	Ywhah	NCNDFQYESK	BrainStem	—	97.1	MRM	['Cys']
Q99LB2	Dhrs4	VNCLAPGLIK	BrainStem	—	97.1	MRM	['Cys']
Q91VD9	Ndufs1	GNDMQVGTYIEK	BrainStem	—	97.1	MRM	['Meth']
P61164	Actr1a	ACYLSINPQK	Cerebrum	—	97.1	MRM	['Cys']
Q9QUJ7	Acsl4	EILSEENEMQPNGK	MockWholeBrain	—	97.1	MRM	['Meth']
P52480	Pkm	CDENILWLDYK	Cerebellum	—	97.1	MRM	['Cys']
P19096	Fasn	DIMLATGK	BrainStem	—	97.1	MRM	['Meth']
P62835	Rap1a	QWCNCAFLESSAK	Cerebellum	—	97.1	MRM	['Cys']
P54071	Idh2	LIDDMVAQVLK	Cerebellum	—	97.1	MRM	['Meth']
Q68FD5	Cltc	LECSEELGDLVK	MockWholeBrain	—	97.0	MRM	['Cys']
A0AAQ4VMQ7	Pcbp2	LVVPASQCGSLIGK	Cerebrum	—	97.0	MRM	['Cys']
Q61990	Pcbp2	LVVPASQCGSLIGK	Cerebrum	—	97.0	MRM	['Cys']
A0A286YCR8	Vdac2	WCEYGLTFTEK	Cerebrum	—	97.0	MRM	['Cys']
Q60930	Vdac2	WCEYGLTFTEK	Cerebrum	—	97.0	MRM	['Cys']
P07356	Anxa2	STVHEILCK	MockWholeBrain	—	97.0	MRM	['Cys']
P54071	Idh2	SSGGFVWACK	MockWholeBrain	—	97.0	MRM	['Cys']
Q8VCT3	Rnpep	AFFPCFDTPAVK	Cerebellum	—	97.0	MRM	['Cys']
Q9JJZ2	Tuba8	TIQFVDWCPTGFK	BrainStem	—	97.0	MRM	['Cys']
P05214	Tuba3a	TIQFVDWCPTGFK	Cerebrum	—	97.0	MRM	['Cys']
Q9JJZ2	Tuba8	TIQFVDWCPTGFK	Cerebrum	—	97.0	MRM	['Cys']
Q3UIB5	Dhrs4	AVVPEMEK	Cerebellum	—	97.0	MRM	['Meth']
P62830	Rpl23	ISLGLPVGAVINCADNTGAK	MockWholeBrain	—	97.0	MRM	['Cys']
P53395	Dbt	LSFMPFFLK	BrainStem	—	97.0	MRM	['Meth']

SysQuan Mouse Database

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