SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
A0AA74KSS9	Ppp4r2	DSELQLSEEK	liver	—	100.0	None	—
A0AA74KSS9	Ppp4r2	GHSDSSASESEVSLLSPVK	liver	—	100.0	None	—
A0AA74KSY4	Hdgf	AGDVLEDSPK	Cerebellum	—	100.0	None	—
A0AA74KSY4	Hdgf	AGDVLEDSPK	Cerebrum	—	100.0	None	—
A0AA74KSY4	Hdgf	AGDVLEDSPK	lung	—	100.0	None	—
A0AA74KSY4	Hdgf	GFSEGLWEIENNPTVK	Cerebrum	—	100.0	None	—
A0AA74KTB8	Ado	GSSTGSEGPAPGFPENLSLLK	Cerebrum	—	100.0	None	—
A0AA74KTB8	Ado	GSSTGSEGPAPGFPENLSLLK	lung	—	99.8	None	—
A0AA74KTB8	Ado	VVEPIRPK	BrainStem	—	100.0	None	—
A0AA74KTB8	Ado	VVEPIRPK	Cerebrum	—	100.0	None	—
A0AA74KTB8	Ado	VVEPIRPK	lung	—	100.0	None	—
A0AA74KTG1	Fhip2a	ALPQSVDPLDIETVEAVNWGLDSYSHK	BrainStem	—	100.0	None	—
A0AA74KTG1	Fhip2a	ELAAIAFVK	BrainStem	—	100.0	None	—
A0AA74KTG1	Fhip2a	ELAAIAFVK	kidney	—	100.0	None	—
A0AA74KTG1	Fhip2a	ELAAIAFVK	liver	—	100.0	None	—
A0AA74KTG1	Fhip2a	GALSVISEDGPK	liver	—	100.0	None	—
A0AA74KTG1	Fhip2a	ILETLYTLGK	BrainStem	—	100.0	None	—
A0AA74KTG1	Fhip2a	ILETLYTLGK	liver	—	100.0	None	—
A0AA74KTG1	Fhip2a	IQDFTPK	BrainStem	—	100.0	None	—
A0AA74KTG1	Fhip2a	IQDFTPK	liver	—	100.0	None	—
A0AA74KTG1	Fhip2a	LTSILQHAVEALAPSLPLQEDFVYHWK	liver	—	100.0	None	—
A0AA74KTG1	Fhip2a	QDPYLVNFFLENK	liver	—	100.0	None	—
A0AA74KTG1	Fhip2a	QPLLPHINVHRPVQK	liver	—	100.0	None	—
A0AA74KTG1	Fhip2a	WEWPGAPKPLEK	BrainStem	—	100.0	None	—
A0AA74KTG1	Fhip2a	WEWPGAPKPLEK	Cerebrum	—	100.0	None	—
A0AA74KTG1	Fhip2a	WEWPGAPKPLEK	liver	—	100.0	None	—
A0AA74KTG5	Zfp384	AYTDAASLEAHLSTHTVK	kidney	—	100.0	None	—
A0AA74KTG5	Zfp384	AYTDAASLEAHLSTHTVK	lung	—	100.0	None	—
A0AA74KTG5	Zfp384	VASTLTEEGGGGGGGGGTVAPPKPPR	kidney	—	100.0	None	—
A0AA74KTG5	Zfp384	VASTLTEEGGGGGGGGGTVAPPKPPR	lung	—	100.0	None	—
A0AA74KUV6	Kctd9	FLLATPTK	Cerebellum	—	100.0	None	—
A0AA74KUV6	Kctd9	VVAVYGTLSDLLSVASSK	BrainStem	—	100.0	None	—
A0AA74KUV6	Kctd9	VVAVYGTLSDLLSVASSK	Cerebellum	—	100.0	None	—
A0AAA9WVZ7	Prss34	GGADIALLK	lung	—	100.0	None	—
A0AAA9WW07	Akap17a	QTGSDNAGTGSGAGAGSDITEGK	lung	—	100.0	None	—
A0AAA9WWE8	Ube2i	DDYPSSPPK	liver	—	100.0	None	—
A0AAA9WWE8	Ube2i	DHPFGFVAVPTK	BrainStem	—	100.0	None	—
A0AAA9WWE8	Ube2i	DHPFGFVAVPTK	Cerebellum	—	100.0	None	—
A0AAA9WWE8	Ube2i	DHPFGFVAVPTK	Cerebrum	—	100.0	None	—
A0AAA9WWE8	Ube2i	DHPFGFVAVPTK	kidney	—	100.0	None	—
A0AAA9WWE8	Ube2i	DHPFGFVAVPTK	liver	—	100.0	None	—
A0AAA9WWE8	Ube2i	GTPWEGGLFK	Cerebellum	—	100.0	None	—
A0AAA9WWH7	Flg2	SVVTIIDVFYK	TailSkin	—	100.0	None	—
A0AAA9WWH7	Flg2	SWHHGTGSGQSLGFGQHGK	TailSkin	—	100.0	None	—
A0AAG1ESS4	Fahd1	IITLEEGDLILTGTPK	Heart	—	100.0	None	—
A0AAG1ESS4	Fahd1	IITLEEGDLILTGTPK	kidney	—	100.0	None	—
A0AAG1ESS4	Fahd1	IITLEEGDLILTGTPK	liver	—	100.0	None	—
A0AAG1ESS4	Fahd1	NLHHEVELGVLLGK	Heart	—	100.0	None	—
A0AAG1ESS4	Fahd1	NLHHEVELGVLLGK	kidney	—	100.0	None	—
A0AAG1ESS4	Fahd1	NLHHEVELGVLLGK	liver	—	100.0	None	—

SysQuan Mouse Database

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