SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
O88958	Gnpda1	TVFVCDEDATLELK	Cerebrum	—	97.6	MRM	['Cys']
P97447	Fhl1	FTAVEDQYYCVDCYK	Cerebrum	—	97.6	MRM	['Cys']
Q3TEN9	Gk	SSSEIYGLMK	Cerebrum	—	97.6	MRM	['Meth']
Q8BTM8	Flna	VTYCPTEPGNYIINIK	BrainStem	—	97.6	MRM	['Cys']
Q5EBQ0	Vdac3	CNTPTYCDLGK	Cerebrum	—	97.6	MRM	['Cys']
Q9CPY7	Lap3	ADMGGAATICSAIVSAAK	Cerebrum	—	97.6	MRM	['Meth', 'Cys']
O88986	Gcat	HLDMADLEAK	BrainStem	—	97.6	MRM	['Meth']
P62334	Psmc6	AVASQLDCNFLK	BrainStem	—	97.6	MRM	['Cys']
P53395	Dbt	LSFMPFFLK	Cerebrum	—	97.6	MRM	['Meth']
P38060	Hmgcl	GYVSCALGCPYEGK	Cerebrum	—	97.5	MRM	['Cys']
A0A0U1RPY8	Coro1a	VSQTTWDSGFCAVNPK	Cerebrum	—	97.5	MRM	['Cys']
Q9D0F9	Pgm1	IDAMHGVVGPYVK	MockWholeBrain	—	97.5	MRM	['Meth']
B2RXS4	Plxnb2	LVECGSLFK	BrainStem	—	97.5	MRM	['Cys']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	Cerebellum	—	97.5	MRM	['Meth']
Q3TSA8	Scamp1	AQQEFATGVMSNK	Cerebrum	—	97.5	MRM	['Meth']
P60521	Gabarapl2	TVPQSSLTMGQLYEK	MockWholeBrain	—	97.5	MRM	['Meth']
P80313	Cct7	QLCDNAGFDATNILNK	MockWholeBrain	—	97.5	MRM	['Cys']
Q99LC5	Etfa	LGGEVSCLVAGTK	MockWholeBrain	—	97.5	MRM	['Cys']
Q99JI6	Rap1b	QWNNCAFLESSAK	Cerebellum	—	97.5	MRM	['Cys']
P14869	Rplp0	AGAIAPCEVTVPAQNTGLGPEK	BrainStem	—	97.5	MRM	['Cys']
Q8BVY8	Cct8	QITSYGETCPGLEQYAIK	Cerebrum	—	97.5	MRM	['Cys']
Q9D1Q6	Erp44	GTINFLHADCDK	BrainStem	—	97.5	MRM	['Cys']
Q3TVK4	Capzb	GCWDSIHVVEVQEK	Cerebrum	—	97.5	MRM	['Cys']
O09061	Psmb1	TVIGCSGFHGDCLTLTK	Cerebellum	—	97.5	MRM	['Cys']
Q8BVI4	Qdpr	VDAILCVAGGWAGGNAK	Cerebrum	—	97.4	MRM	['Cys']
Q60864	Stip1	DCEECIQLEPTFIK	Cerebrum	—	97.4	MRM	['Cys']
P63323	Rps12	LVEALCAEHQINLIK	MockWholeBrain	—	97.4	MRM	['Cys']
P05202	Got2	IPEQSVLLLHACAHNPTGVDPRPEQWK	MockWholeBrain	—	97.4	MRM	['Cys']
P13595	Ncam1	FFLCQVAGDAK	Cerebellum	—	97.4	MRM	['Cys']
Q8K3J1	Ndufs8	YDIDMTK	Cerebrum	—	97.4	MRM	['Meth']
P48722	Hspa4l	GCALQCAILSPAFK	BrainStem	—	97.4	MRM	['Cys']
Q8R5C5	Actr1b	ACYLSINPQK	Cerebrum	—	97.4	MRM	['Cys']
P26039	Tln1	ASAGPQPLLVQSCK	Cerebrum	—	97.4	MRM	['Cys']
Q93092	Taldo1	ALAGCDFLTISPK	MockWholeBrain	—	97.4	MRM	['Cys']
P24527	Lta4h	AILPCQDTPSVK	Cerebrum	—	97.4	MRM	['Cys']
P42932	Cct8	QITSYGETCPGLEQYAIK	Cerebrum	—	97.4	MRM	['Cys']
Q6ZPJ3	Ube2o	LIGTNCIIYPVNSK	MockWholeBrain	—	97.4	MRM	['Cys']
Q91VD9	Ndufs1	GNDMQVGTYIEK	Cerebellum	—	97.4	MRM	['Meth']
Q3TVK4	Capzb	GCWDSIHVVEVQEK	BrainStem	—	97.4	MRM	['Cys']
P68040	Rack1	YWLCAATGPSIK	BrainStem	—	97.4	MRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	Cerebrum	—	97.4	MRM	['Cys']
Q8BVY8	Cct8	QITSYGETCPGLEQYAIK	BrainStem	—	97.4	MRM	['Cys']
P53395	Dbt	AASLGLLQFPILNASVDENCQNITYK	BrainStem	—	97.4	MRM	['Cys']
Q9Z0N1	Eif2s3x	SCGSSTPDEFPTDIPGTK	Cerebellum	—	97.4	MRM	['Cys']
Q3UIB5	Dhrs4	VNCLAPGLIK	Cerebellum	—	97.4	MRM	['Cys']
Q99LB2	Dhrs4	VNCLAPGLIK	Cerebellum	—	97.4	MRM	['Cys']
P56480	Atp5f1b	FLSQPFQVAEVFTGHMGK	BrainStem	—	97.4	MRM	['Meth']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	BrainStem	—	97.4	MRM	['Cys']
P17751	Tpi1	IAVAAQNCYK	Cerebellum	—	97.4	MRM	['Cys']
P18760	Cfl1	AVLFCLSEDK	Cerebellum	—	97.4	MRM	['Cys']

SysQuan Mouse Database

Cart (0)